Information for 20-CCTCGTGATTCTT (Motif 35)

G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
Reverse Opposite:
T C G A C T G A A T C G T G C A C T G A C A G T G T A C G C T A T G A C C T A G C G T A C T A G A C T G
p-value:1e-6
log p-value:-1.573e+01
Information Content per bp:1.680
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif245.5
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets52.0 +/- 29.1bp
Average Position of motif in Background49.7 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTCGTGATTCTT
NCACGTGACN---
 G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CCTCGTGATTCTT-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTCGTGATTCTT
-CAGCTGTTTCCT
 G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

MAX::MYC/MA0059.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGTGATTCTT
ACCACGTGCTC---
 A C G T G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGTGATTCTT
ACCACGTGAC----
 A C G T G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTCGTGATTCTT
KCCACGTGAC----
 A C G T G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTCGTGATTCTT
CCATGTGCTT---
 G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTCGTGATTCTT
GCCACGTG------
 A C G T G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTCGTGATTCTT
ATCACGTGAC----
 A C G T G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCTCGTGATTCTT
-CACGTGNT----
 G T A C A G T C G C A T A G T C A C T G C G A T A C T G G T C A A G C T A C G T A T G C G A C T A G C T
A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T