Information for 24-TCCTCTTCCCTGACCC (Motif 34)

A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C T A G A C G T A G T C C G T A C T A G A C T G A C T G C G T A C G T A A C T G C G T A A C T G A C T G C T G A
p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.921
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.2 +/- 21.8bp
Average Position of motif in Background44.8 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCCTCTTCCCTGACCC------
------NNNNTGACCCGGCGCG
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCCTCTTCCCTGACCC------
------NNCNTGACCCCGCTCT
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCTCTTCCCTGACCC----
GCCTCCTCCMTCWGACTGKS
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCTCTTCCCTGACCC
TKCTGTTCCA------
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCCTCTTCCCTGACCC------
-----TGTCGTGACCCCTTAAT
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:TCCTCTTCCCTGACCC
----------TGACCT
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:TCCTCTTCCCTGACCC--
----------TGACCYCT
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCCTCTTCCCTGACCC
----TGACCTTGACCT
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCTCTTCCCTGACCC
----CTGCCCGCA---
 A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCTTCCCTGACCC
TGACCTTTGCCCTA----
 A C G T A C G T A G C T A G T C T G A C A C G T A G T C A C G T A C G T A G T C A G T C A G T C A C G T T C A G C G T A A G T C A G T C A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T