Information for 21-GAGTGGATGAAAAVHA (Motif 24)

A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
Reverse Opposite:
C G A T C A G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T A G T C A G T C C G T A A G T C C G A T A G T C
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.794
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.4 +/- 12.1bp
Average Position of motif in Background58.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGTGGATGAAAAVHA
--GTGGAT--------
 A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAGTGGATGAAAAVHA
---NGGATTAN-----
 A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGATGAAAAVHA
CTTGAGTGGCT--------
 A C G T A C G T A C G T A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGTGGATGAAAAVHA
TTRAGTGSYK--------
 A C G T A C G T A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAGTGGATGAAAAVHA
-----RHTGWCAR---
 A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGGATGAAAAVHA
TGATTGGCTANN-----
 A C G T A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGTGGATGAAAAVHA
TTAGAGGGATTAACAAT-
 A C G T A C G T A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGATGAAAAVHA
TGCGTGGGYG-------
 A C G T A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAGTGGATGAAAAVHA
---GGGATTAA-----
 A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGATGAAAAVHA
AGAGGGGATTAATTTAT
 A C G T A C T G C G T A C T A G A C G T A C T G A C T G T G C A A C G T A T C G C G T A G T C A C G T A G T C A T C G A G C T A G C T A
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T