Information for 20-YKATTTYAARGGCTRS (Motif 23)

A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
Reverse Opposite:
A T C G A G T C C G T A A C T G A G T C G T A C A G C T A C G T A C G T C T G A C G T A C G T A C G T A C G A T G T C A C T A G
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 19.1bp
Average Position of motif in Background31.7 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YKATTTYAARGGCTRS
--ACATCAAAGG----
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YKATTTYAARGGCTRS
--ACWTCAAAGG----
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YKATTTYAARGGCTRS
NGANTTTTATGGCTCN
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YKATTTYAARGGCTRS
ANTAATTTTATGGCCGN
 A C G T A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YKATTTYAARGGCTRS
CTATTTTTGG------
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YKATTTYAARGGCTRS
---TTTAATTGCN---
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:YKATTTYAARGGCTRS
--ACATCAAAGGNA--
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YKATTTYAARGGCTRS
CGGTTTCAAA------
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:YKATTTYAARGGCTRS
-CCTTTTATAGNC---
 A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YKATTTYAARGGCTRS
KCTATTTTTRGH-----
 A C G T A G T C A C G T C G T A A C G T A C G T A C G T A G C T G T C A C G T A C T G A A C T G A C T G A G T C A C G T C T A G A T G C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T A C G T A C G T A C G T