Information for 18-CCTGKGCCMAAGAGAA (Motif 21)

T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G C T G A T C G C A T A C G T C A G T A C T G A T C G A G T C G T A C G T A C G C T A C A T G A T C G
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.681
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif52.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets54.6 +/- 26.1bp
Average Position of motif in Background55.6 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCTGKGCCMAAGAGAA----
----TGCCAAAATAAACANN
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGKGCCMAAGAGAA
--TGGGGCAAAGGTCA
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTGKGCCMAAGAGAA
--CGTGCCAAG-----
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCTGKGCCMAAGAGAA
----AGCCAATCGG--
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTGKGCCMAAGAGAA
GGGTGTGCCCAAAAGG-
 A C G T T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCTGKGCCMAAGAGAA
----TGCCAA------
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCTGKGCCMAAGAGAA-
---CCGCCCAAGGGCAG
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A A C G T
A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTGKGCCMAAGAGAA
--GGTGCCAAGT----
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTGKGCCMAAGAGAA----
--TGGACCAATCAGCACTCT
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTGKGCCMAAGAGAA
-GTAGGGCAAAGGTCA
 T A G C G T A C C G A T A C T G C A T G C T A G A T G C A G T C G T C A T G C A C G T A C A T G C T G A T A C G T G C A C G T A
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A