Information for 7-CTTTACTGCT (Motif 16)

G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C G T C A C T A G G C A T G T C A C G T A T G C A C A T G
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.840
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif132.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets54.3 +/- 21.1bp
Average Position of motif in Background53.4 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTTACTGCT-
TTTTATGGCTN
 G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTTACTGCT
DGWTTTATGRCN
 A C G T A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTTACTGCT----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTTACTGCT----
GTATTGACAGCTNNTT
 A C G T A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTACTGCT
TTTTATTGC-
 G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTTTACTGCT---
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTTTACTGCT---
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTTACTGCT----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTTACTGCT----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTTACTGCT
TTTTTATTGC-
 A C G T G T A C A C G T C G A T A C G T C G T A A G T C A C G T A T C G A G T C A C G T
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T