Information for 7-CAGGGAGAGAGGC (Motif 10)

G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C T G
p-value:1e-12
log p-value:-2.790e+01
Information Content per bp:1.934
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.6 +/- 25.4bp
Average Position of motif in Background54.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGGGAGAGAGGC--
GTAGGGCAAAGGTCA
 G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGGGAGAGAGGC
CCAGGAACAG----
 A C G T G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGGGAGAGAGGC
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGAGAGAGGC
GAAAGTGAAAGT---
 A C G T A C G T G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGGGAGAGAGGC--
-TGGGGCAAAGGTCA
 G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGGGAGAGAGGC--
AGGGGTCAGAGGTCA
 G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGAGAGAGGC
TCAGNGAGCGTGAC
 A C G T G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGGGAGAGAGGC
GTGGGGGAGGGG-
 G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGGGAGAGAGGC
-RGTGGGYGTGGC
 G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C
A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGAGAGAGGC---
NAAGGGGGCGTGGCTTN
 A C G T G T A C C G T A A C T G A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A