p-value: | 1e-6 |
log p-value: | -1.572e+01 |
Information Content per bp: | 1.808 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.44% |
Number of Background Sequences with motif | 88.2 |
Percentage of Background Sequences with motif | 0.19% |
Average Position of motif in Targets | 65.1 +/- 25.0bp |
Average Position of motif in Background | 43.8 +/- 26.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTATTAGGC- CCATATATGGNA |
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VENTX/MA0724.1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTATTAGGC ACCGATTAG-- |
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NFYB/MA0502.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CCTATTAGGC AAATGGACCAATCAG-- |
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PH0089.1_Isx/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCTATTAGGC-- ACTCCTAATTAGTCGT |
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PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCTATTAGGC AAAAACCATTAAGG |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CCTATTAGGC---- ------AGGCCTNG |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCTATTAGGC-- ----CTAGGCCT |
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PB0078.1_Srf_1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTATTAGGC- TTCCATATATGGAA |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -8 |
Orientation: | forward strand |
Alignment: | --------CCTATTAGGC GATAACATCCTAGTAG-- |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTATTAGGC BCMATTAG-- |
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