Information for 1-RCCACTAGGTGGCACT (Motif 1)

C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T
Reverse Opposite:
C T G A A T C G G A C T T C A G T G A C A G T C G T C A G A T C G T A C G A C T C T G A A T C G G C A T A C T G A T C G G A C T
p-value:1e-447
log p-value:-1.031e+03
Information Content per bp:1.667
Number of Target Sequences with motif361.0
Percentage of Target Sequences with motif41.35%
Number of Background Sequences with motif548.5
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets51.6 +/- 11.7bp
Average Position of motif in Background49.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--RCCACTAGGTGGCACT--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--RCCACTAGGTGGCACT-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:RCCACTAGGTGGCACT----
GCCASCAGGGGGCGCYVNNG
 C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RCCACTAGGTGGCACT
---AACAGATGGC---
 C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--RCCACTAGGTGGCACT
GCACCCCTGGGTGCC---
 A C G T A C G T C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:RCCACTAGGTGGCACT
------GGTTGGCAT-
 C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RCCACTAGGTGGCACT---
--NNNAAGGGGGCGGGNNN
 C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T A C G T A C G T A C G T
A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:RCCACTAGGTGGCACT
------AGGTGTCA--
 C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RCCACTAGGTGGCACT
DCHCAGCAGGRGGCC--
 A C G T C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RCCACTAGGTGGCACT
CACCCCCGGGGGGG---
 A C G T C T G A T A G C A G T C C G T A T A G C G A C T C T G A A C T G C T A G C A G T T C A G A C T G A G T C C T G A T A G C G A C T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T