Information for 15-GGAATTAACC (Motif 8)

C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C
Reverse Opposite:
C T A G A C T G A G C T A C G T C G T A C G T A A C G T C A G T A G T C A G T C
p-value:1e-11
log p-value:-2.731e+01
Information Content per bp:1.859
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif52.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets46.0 +/- 26.2bp
Average Position of motif in Background52.9 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0015.1_Crx/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GGAATTAACC-
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GGAATTAACC--
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GGAATTAACC--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GGAATTAACC--
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTAACC
NNGGATTAGN-
 A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTAACC
NGGGATTA---
 A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGAATTAACC---
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTAACC
VRGGATTARN-
 A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGAATTAACC
GGGATTAA--
 C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGAATTAACC---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C