Information for 7-TTCAARTGCTAAT (Motif 8)

A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T
Reverse Opposite:
G T C A A C G T A C G T C G T A A C T G A G T C G T C A A G T C A G C T A C G T A T C G T C G A G T C A
p-value:1e-14
log p-value:-3.385e+01
Information Content per bp:1.841
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.0 +/- 25.8bp
Average Position of motif in Background45.9 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TTCAARTGCTAAT
---AGGTGTTAAT
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TTCAARTGCTAAT---
----TATGCWAATBAV
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TTCAARTGCTAAT---
----WATGCAAATGAG
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU3F2/MA0787.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTCAARTGCTAAT--
---TTATGCAAATTA
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTCAARTGCTAAT
---TTATGCAAAT
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T
A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTCAARTGCTAAT
----TATGCAAAT
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTCAARTGCTAAT
NTCAAGTGGN---
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTCAARTGCTAAT--
---TTATGCAAATTA
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTCAARTGCTAAT
---ATATGCAAAT
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTCAARTGCTAAT---
---ATATGCAAATNNN
 A C G T A C G T A T G C C G T A T C G A C T A G A C G T A C T G A G T C C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A