Information for 8-TCCCAGTGGG (Motif 5)

A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G
Reverse Opposite:
A G T C G A T C A G T C T G C A A T G C G A C T A C T G C A T G C A T G T C G A
p-value:1e-15
log p-value:-3.596e+01
Information Content per bp:1.708
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif14.18%
Number of Background Sequences with motif2731.5
Percentage of Background Sequences with motif5.68%
Average Position of motif in Targets53.0 +/- 22.9bp
Average Position of motif in Background50.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG
GTCCCCAGGGGA
 A C G T A C G T A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TCCCAGTGGG
DCTCAGCAGG
 A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCCCAGTGGG--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCCCAGTGGG-----
DCHCAGCAGGRGGCC
 A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TCCCAGTGGG--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG---
CCACACAGCAGGAGA
 A C G T A C G T A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG---
GAGCACAGCAGGACA
 A C G T A C G T A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG---
CCACACAGCAGGAGA
 A C G T A C G T A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG--
CACCCCCGGGGGGG
 A C G T A C G T A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCCAGTGGG---
-CACAGCAGGGGG
 A G C T G T A C G T A C A G T C C T G A A T C G A C G T C T A G C T A G C T A G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G