Information for 12-GGCTRCTNAMAGACAM (Motif 21)

C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
Reverse Opposite:
A C T G A C G T A C T G C G A T G A T C A C G T A C T G A C G T T G A C G C T A A T C G G A C T C G T A A T C G A G T C G T A C
p-value:1e-12
log p-value:-2.798e+01
Information Content per bp:1.701
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 22.8bp
Average Position of motif in Background55.6 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCTRCTNAMAGACAM
ACTTGCTACCTACACC---
 A C G T A C G T A C G T C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCTRCTNAMAGACAM
NGCTN-----------
 C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCTRCTNAMAGACAM
-GGTGYTGACAGS---
 C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCTRCTNAMAGACAM
ACATGCTACCTAATAC---
 A C G T A C G T A C G T C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGCTRCTNAMAGACAM
NNNVCTGWGYAAACASN-
 A C G T A C G T C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGCTRCTNAMAGACAM---
--GTTAAAAAAAAAAATTA
 C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGCTRCTNAMAGACAM--
-GTTCAAAAAAAAAATTC
 C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCTRCTNAMAGACAM
KGTTGCTAGGMAACA-
 C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GGCTRCTNAMAGACAM
TWGTCTGV----------
 A C G T A C G T C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GGCTRCTNAMAGACAM---
NNCCTGNAAAAAAAAAAAAA
 A C G T C A T G A C T G A T G C A C G T C T A G T A G C C A G T A C G T C G T A G T A C C G T A C T A G C G T A T G A C G T C A G T A C A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A