p-value: | 1e-12 |
log p-value: | -2.929e+01 |
Information Content per bp: | 1.664 |
Number of Target Sequences with motif | 36.0 |
Percentage of Target Sequences with motif | 5.26% |
Number of Background Sequences with motif | 560.5 |
Percentage of Background Sequences with motif | 1.17% |
Average Position of motif in Targets | 46.5 +/- 26.8bp |
Average Position of motif in Background | 50.8 +/- 29.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox3/MA0514.1/Jaspar
Match Rank: | 1 |
Score: | 0.81 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTTGTCAT CCTTTGTTTT |
|
|
|
Sox2/MA0143.3/Jaspar
Match Rank: | 2 |
Score: | 0.80 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTTGTCAT CCTTTGTT-- |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 3 |
Score: | 0.80 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTTGTCAT CCWTTGTY-- |
|
|
|
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 4 |
Score: | 0.77 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTTGTCAT CCWTTGTYYB |
|
|
|
Sox6/MA0515.1/Jaspar
Match Rank: | 5 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTTGTCAT CCATTGTTTT |
|
|
|
SOX10/MA0442.1/Jaspar
Match Rank: | 6 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTTTGTCAT -CTTTGT--- |
|
|
|
PB0071.1_Sox4_1/Jaspar
Match Rank: | 7 |
Score: | 0.76 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CCTTTGTCAT--- TNNTCCTTTGTTCTNNT |
|
|
|
PB0061.1_Sox11_1/Jaspar
Match Rank: | 8 |
Score: | 0.75 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CCTTTGTCAT--- NNNTCCTTTGTTCTNNN |
|
|
|
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 9 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTTTGTCAT YCTTTGTTCC |
|
|
|
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 10 |
Score: | 0.74 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTTTGTCAT AGGVNCCTTTGT--- |
|
|
|