Information for 5-TGTRGATTTAGKCATG (Motif 13)

A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
Reverse Opposite:
G A T C G T C A A C G T C A T G G T C A A G T C A G C T G T C A C G T A G T C A G C A T A T G C A G T C G T C A G T A C T C G A
p-value:1e-13
log p-value:-3.213e+01
Information Content per bp:1.739
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 31.6bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTRGATTTAGKCATG
TGTGGATTNNN-----
 A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTRGATTTAGKCATG
NNTGTGGATTSS------
 A C G T A C G T A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTRGATTTAGKCATG
NNTGTGGTTT--------
 A C G T A C G T A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTRGATTTAGKCATG
GTCTGTGGTTT--------
 A C G T A C G T A C G T A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGTRGATTTAGKCATG
----NNATGASTCATH
 A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
A C G T A C G T A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGTRGATTTAGKCATG
NNHTGTGGTTWN-------
 A C G T A C G T A C G T A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGTRGATTTAGKCATG--
---NNAATTAGTCACGGT
 A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGTRGATTTAGKCATG--
-------TGAGTCATTTC
 A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTRGATTTAGKCATG
CTGTGGTTTN-------
 A C G T A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGTRGATTTAGKCATG
GCTGTGGTTT--------
 A C G T A C G T A G C T A C T G A C G T C T A G T A C G C G T A C A G T A C G T A C G T C T G A T C A G C A G T G A T C C G T A A C G T C T A G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T