Information for 2-GTAGCGCTCTTGAGTC (Motif 3)

A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
Reverse Opposite:
A T C G G T C A A G T C C G A T A G T C C T G A C G T A A C T G G C T A A C T G A G T C A T C G A G T C A G C T C T G A A G T C
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 26.9bp
Average Position of motif in Background85.4 +/- 0.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GTAGCGCTCTTGAGTC
-----CCACTTGAA--
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTAGCGCTCTTGAGTC
----NSCACTYVAV--
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:GTAGCGCTCTTGAGTC-
----------TGAGTCA
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GTAGCGCTCTTGAGTC
----RSCACTYRAG--
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GTAGCGCTCTTGAGTC
----ACCACTTGAA--
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GTAGCGCTCTTGAGTC---
--------CTTGAGTGGCT
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GTAGCGCTCTTGAGTC
GCNGCCATCTTG----
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GTAGCGCTCTTGAGTC
---AASCACTCAA---
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GTAGCGCTCTTGAGTC
GCCGCCATCTTG----
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:GTAGCGCTCTTGAGTC---
--------NATGAGTCACC
 A C T G A G C T C T G A A C T G A T G C A C T G A G T C C A G T A G T C A C G T A G C T A C T G C G T A A C T G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C