Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-87 | -2.017e+02 | 0.0000 | 165.0 | 20.73% | 1345.6 | 2.86% | motif file (matrix) |
svg |
2 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-84 | -1.950e+02 | 0.0000 | 192.0 | 24.12% | 2011.7 | 4.28% | motif file (matrix) |
svg |
3 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-81 | -1.871e+02 | 0.0000 | 270.0 | 33.92% | 4349.6 | 9.26% | motif file (matrix) |
svg |
4 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-48 | -1.117e+02 | 0.0000 | 311.0 | 39.07% | 8000.8 | 17.03% | motif file (matrix) |
svg |
5 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-16 | -3.804e+01 | 0.0000 | 72.0 | 9.05% | 1341.2 | 2.85% | motif file (matrix) |
svg |
6 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-14 | -3.344e+01 | 0.0000 | 88.0 | 11.06% | 2038.9 | 4.34% | motif file (matrix) |
svg |
7 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-12 | -2.885e+01 | 0.0000 | 48.0 | 6.03% | 816.2 | 1.74% | motif file (matrix) |
svg |
8 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-11 | -2.685e+01 | 0.0000 | 57.0 | 7.16% | 1158.9 | 2.47% | motif file (matrix) |
svg |
9 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.522e+01 | 0.0000 | 43.0 | 5.40% | 749.6 | 1.60% | motif file (matrix) |
svg |
10 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-10 | -2.521e+01 | 0.0000 | 39.0 | 4.90% | 629.2 | 1.34% | motif file (matrix) |
svg |
11 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.300e+01 | 0.0000 | 17.0 | 2.14% | 124.5 | 0.27% | motif file (matrix) |
svg |
12 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-9 | -2.121e+01 | 0.0000 | 53.0 | 6.66% | 1201.1 | 2.56% | motif file (matrix) |
svg |
13 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-8 | -1.937e+01 | 0.0000 | 75.0 | 9.42% | 2133.0 | 4.54% | motif file (matrix) |
svg |
14 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-7 | -1.748e+01 | 0.0000 | 78.0 | 9.80% | 2360.6 | 5.02% | motif file (matrix) |
svg |
15 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-7 | -1.668e+01 | 0.0000 | 69.0 | 8.67% | 2026.5 | 4.31% | motif file (matrix) |
svg |
16 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-6 | -1.595e+01 | 0.0000 | 21.0 | 2.64% | 305.4 | 0.65% | motif file (matrix) |
svg |
17 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-6 | -1.550e+01 | 0.0000 | 40.0 | 5.03% | 937.4 | 2.00% | motif file (matrix) |
svg |
18 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.515e+01 | 0.0000 | 51.0 | 6.41% | 1371.4 | 2.92% | motif file (matrix) |
svg |
19 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-6 | -1.463e+01 | 0.0000 | 69.0 | 8.67% | 2144.2 | 4.56% | motif file (matrix) |
svg |
20 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-6 | -1.437e+01 | 0.0000 | 61.0 | 7.66% | 1819.3 | 3.87% | motif file (matrix) |
svg |
21 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-6 | -1.409e+01 | 0.0000 | 34.0 | 4.27% | 771.2 | 1.64% | motif file (matrix) |
svg |
22 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-5 | -1.325e+01 | 0.0000 | 40.0 | 5.03% | 1027.1 | 2.19% | motif file (matrix) |
svg |
23 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.309e+01 | 0.0000 | 40.0 | 5.03% | 1035.0 | 2.20% | motif file (matrix) |
svg |
24 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.287e+01 | 0.0000 | 34.0 | 4.27% | 816.8 | 1.74% | motif file (matrix) |
svg |
25 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-5 | -1.219e+01 | 0.0001 | 5.0 | 0.63% | 15.0 | 0.03% | motif file (matrix) |
svg |
26 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-5 | -1.179e+01 | 0.0001 | 58.0 | 7.29% | 1846.3 | 3.93% | motif file (matrix) |
svg |
27 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-5 | -1.178e+01 | 0.0001 | 34.0 | 4.27% | 860.9 | 1.83% | motif file (matrix) |
svg |
28 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-4 | -1.127e+01 | 0.0002 | 30.0 | 3.77% | 730.9 | 1.56% | motif file (matrix) |
svg |
29 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-4 | -1.035e+01 | 0.0004 | 38.0 | 4.77% | 1085.9 | 2.31% | motif file (matrix) |
svg |
30 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-4 | -1.019e+01 | 0.0005 | 80.0 | 10.05% | 2970.5 | 6.32% | motif file (matrix) |
svg |
31 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-4 | -9.296e+00 | 0.0011 | 21.0 | 2.64% | 475.4 | 1.01% | motif file (matrix) |
svg |
32 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-4 | -9.276e+00 | 0.0011 | 148.0 | 18.59% | 6475.3 | 13.78% | motif file (matrix) |
svg |
33 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-3 | -8.512e+00 | 0.0022 | 20.0 | 2.51% | 467.4 | 0.99% | motif file (matrix) |
svg |
34 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -8.094e+00 | 0.0033 | 38.0 | 4.77% | 1216.0 | 2.59% | motif file (matrix) |
svg |
35 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -7.586e+00 | 0.0053 | 26.0 | 3.27% | 739.9 | 1.57% | motif file (matrix) |
svg |
36 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.419e+00 | 0.0061 | 36.0 | 4.52% | 1172.2 | 2.49% | motif file (matrix) |
svg |
37 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.276e+00 | 0.0068 | 29.0 | 3.64% | 880.7 | 1.87% | motif file (matrix) |
svg |
38 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-3 | -7.154e+00 | 0.0075 | 13.0 | 1.63% | 266.3 | 0.57% | motif file (matrix) |
svg |
39 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -6.763e+00 | 0.0108 | 17.0 | 2.14% | 423.9 | 0.90% | motif file (matrix) |
svg |
40 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.606e+00 | 0.0123 | 82.0 | 10.30% | 3445.8 | 7.33% | motif file (matrix) |
svg |
41 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -6.549e+00 | 0.0127 | 31.0 | 3.89% | 1011.9 | 2.15% | motif file (matrix) |
svg |
42 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.478e+00 | 0.0133 | 30.0 | 3.77% | 973.0 | 2.07% | motif file (matrix) |
svg |
43 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -6.116e+00 | 0.0187 | 21.0 | 2.64% | 611.1 | 1.30% | motif file (matrix) |
svg |
44 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -5.972e+00 | 0.0211 | 9.0 | 1.13% | 167.4 | 0.36% | motif file (matrix) |
svg |
45 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.921e+00 | 0.0217 | 30.0 | 3.77% | 1010.0 | 2.15% | motif file (matrix) |
svg |
46 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.888e+00 | 0.0219 | 94.0 | 11.81% | 4156.2 | 8.85% | motif file (matrix) |
svg |
47 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.828e+00 | 0.0228 | 13.0 | 1.63% | 310.7 | 0.66% | motif file (matrix) |
svg |
48 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -5.455e+00 | 0.0324 | 24.0 | 3.02% | 777.0 | 1.65% | motif file (matrix) |
svg |
49 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.429e+00 | 0.0326 | 40.0 | 5.03% | 1511.7 | 3.22% | motif file (matrix) |
svg |
50 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.422e+00 | 0.0326 | 71.0 | 8.92% | 3041.4 | 6.47% | motif file (matrix) |
svg |
51 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.403e+00 | 0.0326 | 89.0 | 11.18% | 3969.4 | 8.45% | motif file (matrix) |
svg |
52 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.299e+00 | 0.0350 | 91.0 | 11.43% | 4089.1 | 8.70% | motif file (matrix) |
svg |
53 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -5.279e+00 | 0.0350 | 7.0 | 0.88% | 122.0 | 0.26% | motif file (matrix) |
svg |
54 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.268e+00 | 0.0350 | 22.0 | 2.76% | 702.0 | 1.49% | motif file (matrix) |
svg |
55 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -5.082e+00 | 0.0411 | 8.0 | 1.01% | 158.1 | 0.34% | motif file (matrix) |
svg |
56 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.002e+00 | 0.0437 | 73.0 | 9.17% | 3201.2 | 6.81% | motif file (matrix) |
svg |
57 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -4.969e+00 | 0.0444 | 110.0 | 13.82% | 5147.6 | 10.96% | motif file (matrix) |
svg |
58 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-2 | -4.851e+00 | 0.0491 | 31.0 | 3.89% | 1139.8 | 2.43% | motif file (matrix) |
svg |
59 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.827e+00 | 0.0494 | 27.0 | 3.39% | 956.2 | 2.04% | motif file (matrix) |
svg |
60 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -4.816e+00 | 0.0494 | 60.0 | 7.54% | 2563.4 | 5.46% | motif file (matrix) |
svg |
61 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.658e+00 | 0.0566 | 34.0 | 4.27% | 1298.2 | 2.76% | motif file (matrix) |
svg |
62 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.637e+00 | 0.0569 | 8.0 | 1.01% | 171.9 | 0.37% | motif file (matrix) |
svg |