Information for 7-ACAAACAAAAGAA (Motif 10)

C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A
Reverse Opposite:
A G C T A G C T A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 17.8bp
Average Position of motif in Background51.5 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACAAACAAAAGAA
-AAAACAAAGG--
 C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACAAACAAAAGAA--
AGAAGAACAAAGGACTA
 A C G T A C G T C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACAAACAAAAGAA--
ATAAGAACAAAGGACTA
 A C G T A C G T C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACAAACAAAAGAA
AGAAACGAAAGT-
 C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACAAACAAAAGAA-
AACAAACAACAAGAG
 A C G T C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACAAACAAAAGAA
AAAGTAAACAAAAATT
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACAAACAAAAGAA
AAAAATAACAAACGG-
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACAAACAAAAGAA
---RACAAWGG--
 C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACAAACAAAAGAA-
AAACAGACAAAGGAAT
 A C G T A C G T C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ACAAACAAAAGAA
CAAAAGTAAACAAAG---
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C T G A C T G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T