Information for 6-GATGGCACAWCCATTA (Motif 9)

C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A
Reverse Opposite:
A G C T C G T A C T G A C G A T C A T G A C T G C G A T A C G T A C T G A G C T A C T G T G A C A G T C T C G A C G A T A G T C
p-value:1e-16
log p-value:-3.791e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 22.9bp
Average Position of motif in Background37.2 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.69
Offset:7
Orientation:forward strand
Alignment:GATGGCACAWCCATTA-
-------AAACMATTAN
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.68
Offset:8
Orientation:forward strand
Alignment:GATGGCACAWCCATTA-
--------ACCGATTAG
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.65
Offset:8
Orientation:reverse strand
Alignment:GATGGCACAWCCATTA--
--------NNCAATTANN
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.64
Offset:9
Orientation:forward strand
Alignment:GATGGCACAWCCATTA-
---------GCAATTAG
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GATGGCACAWCCATTA---
-----AAAAACCATTAAGG
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GATGGCACAWCCATTA----
----AAAAACCAATTAAGAA
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GATGGCACAWCCATTA
---GCCACACCCA---
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:GATGGCACAWCCATTA-
---------BCMATTAG
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.62
Offset:9
Orientation:forward strand
Alignment:GATGGCACAWCCATTA-
---------CCAATTAA
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GATGGCACAWCCATTA
--------ACCAATTA
 C T A G G C T A A G C T T C A G A C T G A G T C C T G A G T A C C G T A G C T A A G T C G T A C C G T A A G C T C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A