Information for 5-GGAGGTGATAATA (Motif 6)

C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
Reverse Opposite:
G C A T C G T A A C G T C G A T C G T A A C G T G T A C G T C A T A G C A T G C A G C T G T A C G A T C
p-value:1e-17
log p-value:-3.930e+01
Information Content per bp:1.654
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif172.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets61.8 +/- 28.4bp
Average Position of motif in Background47.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GGAGGTGATAATA
--AGGTGTTAAT-
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGAGGTGATAATA
--AGGTGTCA---
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGAGGTGATAATA
--AGGTGTGAAM-
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGAGGTGATAATA
-AAGGTGTGAAA-
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGAGGTGATAATA
-AAGGTGTKAA--
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGAGGTGATAATA
--AGGTGTGAAA-
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGAGGTGATAATA
--AGGTGTGA---
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGAGGTGATAATA
--AGGTGTGA---
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGAGGTGATAATA-
-AAGGTGTGAAAAT
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGAGGTGATAATA
GGAAGTGAAAST-
 C T A G A C T G T C G A A T C G A T C G A C G T A C T G T G C A G C A T G C T A C G T A G C A T C G T A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T