Information for 14-ACTAATCCCC (Motif 33)

T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C
Reverse Opposite:
C T A G A C T G C T A G A T C G C G T A G C A T A C G T G T C A T A C G A C G T
p-value:1e-9
log p-value:-2.106e+01
Information Content per bp:1.733
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif333.5
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets45.3 +/- 23.9bp
Average Position of motif in Background50.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC/MA0648.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:ACTAATCCCC
GCTAATCCCC
 T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ACTAATCCCC
CCTAATCCGC
 T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:ACTAATCCCC--
-CTAATCCTCTT
 T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C A C G T A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:ACTAATCCCC
-YTAATCCY-
 T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:ACTAATCCCC
CTTAATCCC-
 T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----ACTAATCCCC--
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----ACTAATCCCC---
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:ACTAATCCCC
NYTAATCCYB
 T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--ACTAATCCCC----
AGGCTAATCCCCAANG
 A C G T A C G T T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ACTAATCCCC
-TTAATCCC-
 T G C A A G T C A C G T C G T A C G T A A C G T T A G C G A T C G T A C G A T C
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T