Information for 21-AGTTTTGMACATTCAA (Motif 30)

C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
Reverse Opposite:
A C G T C G A T C T A G C T G A C G T A A C G T A C T G G C A T A C G T G A T C G T C A G T C A G T C A C T G A A G T C A G C T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.745
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.4 +/- 23.7bp
Average Position of motif in Background55.9 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:AGTTTTGMACATTCAA--
---------NATTCAAAT
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTTTTGMACATTCAA
TACATGTGCACATAAAA
 A C G T C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.55
Offset:10
Orientation:forward strand
Alignment:AGTTTTGMACATTCAA
----------ATTAAA
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGTTTTGMACATTCAA
-ATTATGCTAATTT--
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTTTTGMACATTCAA
CAGATGTGCACATACGT
 A C G T C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGTTTTGMACATTCAA-----
----GACCACATTCATACAAT
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGTTTTGMACATTCAA
--TTATGCAAATTA--
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGTTTTGMACATTCAA-
-------CACATTCCAT
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGTTTTGMACATTCAA
--TTATGCAAATTA--
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGTTTTGMACATTCAA
--GGTTAAACATTAA-
 C T G A C T A G A G C T A C G T C A G T A C G T C A T G T G C A C G T A G T A C C G T A A C G T A G C T G A T C G C T A C G T A
A C G T A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T