p-value: | 1e-10 |
log p-value: | -2.520e+01 |
Information Content per bp: | 1.843 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.84% |
Number of Background Sequences with motif | 3.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.7 +/- 16.6bp |
Average Position of motif in Background | 72.8 +/- 11.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0031.1_Hoxa3_1/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGCTGATTAVCA TGGAGGTAATTAAC- |
|
|
|
PH0045.1_Hoxa1/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGCTGATTAVCA- CTGAGCTAATTACCGT |
|
|
|
Hoxb5/MA0904.1/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGCTGATTAVCA- ATGNGCTAATTANCNT |
|
|
|
PH0060.1_Hoxb5/Jaspar
Match Rank: | 4 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGCTGATTAVCA- ATGNGCTAATTANCNT |
|
|
|
POU6F2/MA0793.1/Jaspar
Match Rank: | 5 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGCTGATTAVCA -AGCTCATTAT-- |
|
|
|
PH0155.1_Prrx2/Jaspar
Match Rank: | 6 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGCTGATTAVCA--- AAAGCTAATTAGCGAAA |
|
|
|
EVX1/MA0887.1/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAGCTGATTAVCA --GGTAATTAGC- |
|
|
|
PH0074.1_Hoxd1/Jaspar
Match Rank: | 8 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGCTGATTAVCA-- NNNAGCTAATTAGCTTA |
|
|
|
PH0049.1_Hoxa2/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGCTGATTAVCA- NTGAGCTAATTACCNT |
|
|
|
PH0036.1_Gsx2/Jaspar
Match Rank: | 10 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGCTGATTAVCA- NTNNGCTAATTANCNT |
|
|
|