Information for 10-GCACTTTCAT (Motif 20)

A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T
Reverse Opposite:
T G C A C A G T A C T G G T C A C T G A C T G A T A C G C G A T A C T G A G T C
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.828
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif187.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets51.6 +/- 20.5bp
Average Position of motif in Background46.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCACTTTCAT-----
GACCACATTCATACAAT
 A C G T A C G T A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCACTTTCAT-----
TCACTTTCACTTTCN
 A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCACTTTCAT----
--ACTTTCACTTTC
 A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCACTTTCAT------
--ACATTCATGACACG
 A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCACTTTCAT----
--ACTTTCGTTTCT
 A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCACTTTCAT
----TTTAAT
 A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCACTTTCAT
GCACTTAA--
 A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCACTTTCAT
AAGCACTTAA--
 A C G T A C G T A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCACTTTCAT-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCACTTTCAT-----
AATCCCTTTGATCTATC
 A C G T A C G T A C T G A G T C G C T A A T G C G A C T A G C T A C G T G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C