Information for 8-TTAATGGCTT (Motif 11)

A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T
Reverse Opposite:
C T G A C G T A T A C G T A G C A G T C G T C A G A C T A G C T G T C A T C G A
p-value:1e-14
log p-value:-3.260e+01
Information Content per bp:1.625
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif13.73%
Number of Background Sequences with motif2756.3
Percentage of Background Sequences with motif5.83%
Average Position of motif in Targets51.9 +/- 25.0bp
Average Position of motif in Background49.4 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTAATGGCTT
NTAATKGTTT
 A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTAATGGCTT
GTTAATGGCC-
 A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTAATGGCTT--
CCTTAATNGNTTTT
 A C G T A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PH0088.1_Isl2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTAATGGCTT---
AAATTAATTGATTTNG
 A C G T A C G T A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T A C G T A C G T A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTAATGGCTT---
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

VENTX/MA0724.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAATGGCTT
CTAATCGNT-
 A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATGGCTT--
ATTCNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATGGCTT--
ATTCNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATGGCTT--
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATGGCTT--
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A G C T C A G T T C G A C T G A C A G T C T A G A T C G A T G C C G A T A G C T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T