Information for 7-BTAATCMBCB (Motif 3)

A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
Reverse Opposite:
T C A G T C A G T C A G A C T G A C T G C T G A A C G T A C G T C G T A T C A G
p-value:1e-15
log p-value:-3.567e+01
Information Content per bp:1.683
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.30%
Number of Background Sequences with motif955.4
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets52.1 +/- 25.1bp
Average Position of motif in Background49.3 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:BTAATCMBCB
YTAATCCY--
 A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:BTAATCMBCB
TTAATCCG--
 A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:BTAATCMBCB
TTAATCCT--
 A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-BTAATCMBCB
CCTAATCCGC-
 A C G T A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-BTAATCMBCB
NYTAATCCYB-
 A C G T A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-BTAATCMBCB
GCTAATCCCC-
 A C G T A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-BTAATCMBCB
CTTAATCCC--
 A C G T A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.89
Offset:0
Orientation:forward strand
Alignment:BTAATCMBCB
TTAATCCC--
 A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-BTAATCMBCB
GCTAATCC---
 A C G T A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:BTAATCMBCB-
CTAATCCTCTT
 A G T C A C G T G T C A C G T A A G C T A G T C G T A C A G T C A G T C A G T C A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T