Information for 12-RGSRGCTGCYSGRGGS (Motif 18)

T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
Reverse Opposite:
A T G C A T G C A G T C G A C T T A G C T A C G C T G A A T C G G T A C C T G A T A C G A T G C G A C T A T C G A G T C A G C T
p-value:1e-11
log p-value:-2.548e+01
Information Content per bp:1.601
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 15.3bp
Average Position of motif in Background31.8 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGSRGCTGCYSGRGGS
CGCAGCTGCG------
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGSRGCTGCYSGRGGS
AGCAGCTGCT------
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---RGSRGCTGCYSGRGGS
CTCAGCAGCTGCTACTG--
 A C G T A C G T A C G T T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RGSRGCTGCYSGRGGS
AGCAGCTGCTNN----
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:RGSRGCTGCYSGRGGS-
------NGCCTGAGGCN
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RGSRGCTGCYSGRGGS
-NCAGCTGCTG-----
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:RGSRGCTGCYSGRGGS-
------TGCCTGAGGCN
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:RGSRGCTGCYSGRGGS-
------NGCCTNAGGCN
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RGSRGCTGCYSGRGGS
GACAGCTGCAG-----
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RGSRGCTGCYSGRGGS
-GGGGCCCAAGGGGG-
 T C G A A C T G A T G C C T G A A T C G A T G C G A C T A C T G A T G C A G C T A T G C A T C G C T G A C T A G A T C G T A C G
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T