Information for 10-AGGTGTGAAA (Motif 12)

C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
Reverse Opposite:
C G A T A C G T A C G T A T G C G T C A A G T C G T C A A G T C G T A C A G C T
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.854
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif218.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets43.0 +/- 28.1bp
Average Position of motif in Background48.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAA
AGGTGTGAAA
 C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.95
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTGAAA---
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAAA--
AAGGTGTGAAAAT
 A C G T C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAAA
AAGGTGTGAAA
 A C G T C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAAA
AAGGTGTGAA-
 A C G T C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAAA
TAGGTGTGAAG
 A C G T C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAA
AGGTGTGA--
 C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAA
AGGTGTGA--
 C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAA
AGGTGTGAAM
 C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAA
AGGTGTGA--
 C T G A A C T G A C T G C A G T C T A G C A G T A T C G C G T A T G C A C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T