Information for 5-ATGTTAATRAACAGCC (Motif 7)

G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G T G A C A C G T A C T G G C A T A G C T G A C T C G T A C A G T A C G T T C G A C G T A A G T C G C T A C G A T
p-value:1e-11
log p-value:-2.760e+01
Information Content per bp:1.707
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.4 +/- 23.4bp
Average Position of motif in Background57.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATRAACAGCC
AATATTAATAAAGA---
 A C G T G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATGTTAATRAACAGCC
----AAATAAACA---
 G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ATGTTAATRAACAGCC
------GTAAACA---
 G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATGTTAATRAACAGCC
---WWTRTAAACAVG-
 G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATGTTAATRAACAGCC
-----AATAAACAATN
 G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ATGTTAATRAACAGCC
------GTAAACAA--
 G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATRAACAGCC
CGAATTAATTAAGAAAC
 A C G T G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0051.1_Hoxa4/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGTTAATRAACAGCC
GATTATTAATTAACTTG-
 A C G T A C G T G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATGTTAATRAACAGCC
ATATTAATTAA-----
 G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATRAACAGCC
WATGCAAATGAG-----
 A C G T G C T A C A G T T A C G A C G T A C G T C G T A G C T A C G A T C T G A C T G A C G T A G T A C C G T A A C T G G T A C A G T C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T