Information for 6-AAATTGCTTTTTA (Motif 4)

G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T C G A T A C G T
p-value:1e-14
log p-value:-3.246e+01
Information Content per bp:1.896
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 22.1bp
Average Position of motif in Background56.0 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AAATTGCTTTTTA
NNNTTAATTGGTTTTT-
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAATTGCTTTTTA
GNNTTAATTGGTTGTT-
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAATTGCTTTTTA
NTTATTGATTTTTT
 A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAATTGCTTTTTA
NNNTTAATTGGTTTTN-
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAATTGCTTTTTA--
NTNTTGTTGTTTGTN
 G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAATTGCTTTTTA
ATTATCGATTTTTT
 A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAATTGCTTTTTA-----
--ANTCCTTTGTCTNNNN
 G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAATTGCTTTTTA
ANTATCGATTTTTN
 A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAATTGCTTTTTA
ATNNACTAATTACTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AAATTGCTTTTTA
ATTCNTTAATTGCTTGT--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A C G A T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T G T C A
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T A C G T