Information for 12-GCAATTGCTC (Motif 18)

A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C
Reverse Opposite:
T C A G C G T A C A T G A T G C C G T A C G T A A C G T C G A T A C T G A G T C
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.842
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif64.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets55.0 +/- 31.5bp
Average Position of motif in Background47.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0007.1_Barx1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCAATTGCTC---
AAAGTAATTAGTGAAT
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C A C G T A C G T A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCAATTGCTC
-CCATTGTTC
 A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCAATTGCTC-----
AATCAATTGTTCCGCTA
 A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PH0024.1_Dlx5/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCAATTGCTC-
NANNGNTAATTACCNN
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCAATTGCTC
AGATGCAATCCC--
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCAATTGCTC-
NTNAGNTAATTACCTN
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCAATTGCTC----
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCAATTGCTC
AACACTGCAATTGTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCAATTGCTC--
NNATNAATTGTTTNN
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCAATTGCTC---
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T C G A T A T C G G T A C C G A T A G T C A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T