Information for 6-TCAGCCTGCT (Motif 15)

C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T
Reverse Opposite:
C G T A C T A G T G A C C T G A A C T G A C T G A G T C G A C T A C T G G T C A
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.834
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif225.8
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets54.4 +/- 30.6bp
Average Position of motif in Background53.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCAGCCTGCT---
-CCCCCTGCTGTG
 C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAGCCTGCT
-CAGCC----
 C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCTGCT
DCTCAGCAGG--
 A C G T A C G T C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCTGCT
NGTCAGCANTTT
 A C G T A C G T C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCCTGCT
GTCAGCANNTN
 A C G T C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCAGCCTGCT
BCAGACWA--
 C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCCTGCT
TGAGTCAGCA----
 A C G T A C G T A C G T A C G T C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCAGCCTGCT------
-TNTCCTGCTGTGNNG
 C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCAGCCTGCT------
-NNTCCTGCTGTGNNN
 C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCAGCCTGCT----
GGCCYCCTGCTGDGH
 A C G T C A G T A G T C C T G A A C T G A G T C G T A C G A C T A C T G A G T C C G A T A C G T A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C