Information for 12-TGTCTTTGCTACT (Motif 13)

A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T
Reverse Opposite:
C G T A C T A G C G A T C G T A T C A G G T A C G C T A G C T A C G T A T C A G C G T A G T A C T G C A
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.644
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.6 +/- 29.0bp
Average Position of motif in Background74.3 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTCTTTGCTACT
--YCTTTGTTCC-
 A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTTTGCTACT
BNTGDCCTTG-----
 A C G T A C G T A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTCTTTGCTACT---
-NCNTTTGTTATTTNN
 A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T A C G T A C G T A C G T
A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTTTGCTACT--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTTTGCTACT--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTCTTTGCTACT-
TNCCTTTGATCTTN
 A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTCTTTGCTACT-
--CCTTTGATCTTT
 A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T A C G T
A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTGCTACT------
---TNNTGCTACTGTNNNN
 A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGTCTTTGCTACT
--CCWTTGTYYB-
 A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTCTTTGCTACT------
---CNNNGCTACTGTANNN
 A C G T A C T G G A C T A G T C G C A T C G A T C A G T A C T G A G T C G A C T G C T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T