Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-237 | -5.480e+02 | 0.0000 | 337.0 | 46.74% | 2259.6 | 4.79% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-220 | -5.076e+02 | 0.0000 | 370.0 | 51.32% | 3356.6 | 7.12% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-208 | -4.802e+02 | 0.0000 | 331.0 | 45.91% | 2661.2 | 5.64% | motif file (matrix) |
svg |
4 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-191 | -4.399e+02 | 0.0000 | 214.0 | 29.68% | 824.6 | 1.75% | motif file (matrix) |
svg |
5 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-187 | -4.326e+02 | 0.0000 | 317.0 | 43.97% | 2763.8 | 5.86% | motif file (matrix) |
svg |
6 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-142 | -3.285e+02 | 0.0000 | 289.0 | 40.08% | 3165.3 | 6.71% | motif file (matrix) |
svg |
7 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-138 | -3.200e+02 | 0.0000 | 263.0 | 36.48% | 2582.9 | 5.48% | motif file (matrix) |
svg |
8 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-137 | -3.172e+02 | 0.0000 | 250.0 | 34.67% | 2295.3 | 4.87% | motif file (matrix) |
svg |
9 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-123 | -2.839e+02 | 0.0000 | 217.0 | 30.10% | 1862.1 | 3.95% | motif file (matrix) |
svg |
10 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-114 | -2.627e+02 | 0.0000 | 227.0 | 31.48% | 2321.8 | 4.92% | motif file (matrix) |
svg |
11 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-107 | -2.467e+02 | 0.0000 | 227.0 | 31.48% | 2514.6 | 5.33% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-102 | -2.351e+02 | 0.0000 | 169.0 | 23.44% | 1282.5 | 2.72% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-83 | -1.932e+02 | 0.0000 | 287.0 | 39.81% | 5403.6 | 11.46% | motif file (matrix) |
svg |
14 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-57 | -1.318e+02 | 0.0000 | 222.0 | 30.79% | 4442.1 | 9.42% | motif file (matrix) |
svg |
15 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-54 | -1.261e+02 | 0.0000 | 167.0 | 23.16% | 2642.7 | 5.61% | motif file (matrix) |
svg |
16 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-49 | -1.147e+02 | 0.0000 | 135.0 | 18.72% | 1871.3 | 3.97% | motif file (matrix) |
svg |
17 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-49 | -1.139e+02 | 0.0000 | 169.0 | 23.44% | 2965.9 | 6.29% | motif file (matrix) |
svg |
18 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-48 | -1.114e+02 | 0.0000 | 126.0 | 17.48% | 1669.7 | 3.54% | motif file (matrix) |
svg |
19 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-24 | -5.581e+01 | 0.0000 | 217.0 | 30.10% | 7053.4 | 14.96% | motif file (matrix) |
svg |
20 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-17 | -3.940e+01 | 0.0000 | 119.0 | 16.50% | 3323.3 | 7.05% | motif file (matrix) |
svg |
21 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-13 | -3.086e+01 | 0.0000 | 83.0 | 11.51% | 2165.3 | 4.59% | motif file (matrix) |
svg |
22 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-12 | -2.778e+01 | 0.0000 | 137.0 | 19.00% | 4798.3 | 10.18% | motif file (matrix) |
svg |
23 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-11 | -2.748e+01 | 0.0000 | 69.0 | 9.57% | 1731.0 | 3.67% | motif file (matrix) |
svg |
24 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-11 | -2.644e+01 | 0.0000 | 165.0 | 22.88% | 6317.7 | 13.40% | motif file (matrix) |
svg |
25 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-10 | -2.460e+01 | 0.0000 | 40.0 | 5.55% | 746.6 | 1.58% | motif file (matrix) |
svg |
26 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-10 | -2.347e+01 | 0.0000 | 116.0 | 16.09% | 4056.6 | 8.60% | motif file (matrix) |
svg |
27 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-8 | -1.972e+01 | 0.0000 | 192.0 | 26.63% | 8393.1 | 17.80% | motif file (matrix) |
svg |
28 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-8 | -1.877e+01 | 0.0000 | 41.0 | 5.69% | 955.0 | 2.03% | motif file (matrix) |
svg |
29 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-8 | -1.867e+01 | 0.0000 | 114.0 | 15.81% | 4307.5 | 9.14% | motif file (matrix) |
svg |
30 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-8 | -1.866e+01 | 0.0000 | 85.0 | 11.79% | 2878.7 | 6.11% | motif file (matrix) |
svg |
31 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-8 | -1.853e+01 | 0.0000 | 116.0 | 16.09% | 4420.7 | 9.38% | motif file (matrix) |
svg |
32 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-7 | -1.734e+01 | 0.0000 | 79.0 | 10.96% | 2678.5 | 5.68% | motif file (matrix) |
svg |
33 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-6 | -1.564e+01 | 0.0000 | 64.0 | 8.88% | 2081.5 | 4.42% | motif file (matrix) |
svg |
34 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-6 | -1.472e+01 | 0.0000 | 268.0 | 37.17% | 13480.9 | 28.59% | motif file (matrix) |
svg |
35 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.388e+01 | 0.0000 | 64.0 | 8.88% | 2192.4 | 4.65% | motif file (matrix) |
svg |
36 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-5 | -1.227e+01 | 0.0000 | 45.0 | 6.24% | 1410.8 | 2.99% | motif file (matrix) |
svg |
37 |
| PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.179e+01 | 0.0001 | 39.0 | 5.41% | 1169.5 | 2.48% | motif file (matrix) |
svg |
38 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.151e+01 | 0.0001 | 46.0 | 6.38% | 1500.5 | 3.18% | motif file (matrix) |
svg |
39 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.026e+01 | 0.0003 | 74.0 | 10.26% | 2976.4 | 6.31% | motif file (matrix) |
svg |
40 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -9.709e+00 | 0.0006 | 23.0 | 3.19% | 590.4 | 1.25% | motif file (matrix) |
svg |
41 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.959e+00 | 0.0011 | 89.0 | 12.34% | 3911.4 | 8.30% | motif file (matrix) |
svg |
42 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.654e+00 | 0.0015 | 184.0 | 25.52% | 9417.0 | 19.97% | motif file (matrix) |
svg |
43 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.514e+00 | 0.0017 | 129.0 | 17.89% | 6213.3 | 13.18% | motif file (matrix) |
svg |
44 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.457e+00 | 0.0018 | 178.0 | 24.69% | 9093.1 | 19.29% | motif file (matrix) |
svg |
45 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-3 | -8.366e+00 | 0.0019 | 5.0 | 0.69% | 35.6 | 0.08% | motif file (matrix) |
svg |
46 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.269e+00 | 0.0020 | 38.0 | 5.27% | 1335.1 | 2.83% | motif file (matrix) |
svg |
47 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -8.022e+00 | 0.0025 | 90.0 | 12.48% | 4080.5 | 8.66% | motif file (matrix) |
svg |
48 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.917e+00 | 0.0028 | 30.0 | 4.16% | 982.6 | 2.08% | motif file (matrix) |
svg |
49 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -7.850e+00 | 0.0029 | 44.0 | 6.10% | 1660.1 | 3.52% | motif file (matrix) |
svg |
50 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.466e+00 | 0.0042 | 14.0 | 1.94% | 322.2 | 0.68% | motif file (matrix) |
svg |
51 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.383e+00 | 0.0044 | 8.0 | 1.11% | 120.2 | 0.26% | motif file (matrix) |
svg |
52 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.633e+00 | 0.0092 | 15.0 | 2.08% | 392.3 | 0.83% | motif file (matrix) |
svg |
53 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -6.616e+00 | 0.0092 | 31.0 | 4.30% | 1116.0 | 2.37% | motif file (matrix) |
svg |
54 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.380e+00 | 0.0114 | 25.0 | 3.47% | 846.8 | 1.80% | motif file (matrix) |
svg |
55 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-2 | -6.342e+00 | 0.0117 | 9.0 | 1.25% | 175.1 | 0.37% | motif file (matrix) |
svg |
56 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -6.222e+00 | 0.0129 | 63.0 | 8.74% | 2821.8 | 5.99% | motif file (matrix) |
svg |
57 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -6.170e+00 | 0.0134 | 49.0 | 6.80% | 2073.4 | 4.40% | motif file (matrix) |
svg |
58 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.089e+00 | 0.0142 | 38.0 | 5.27% | 1508.8 | 3.20% | motif file (matrix) |
svg |
59 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.073e+00 | 0.0142 | 18.0 | 2.50% | 545.1 | 1.16% | motif file (matrix) |
svg |
60 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.056e+00 | 0.0142 | 38.0 | 5.27% | 1512.0 | 3.21% | motif file (matrix) |
svg |
61 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.041e+00 | 0.0142 | 67.0 | 9.29% | 3064.7 | 6.50% | motif file (matrix) |
svg |
62 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -5.588e+00 | 0.0220 | 84.0 | 11.65% | 4086.7 | 8.67% | motif file (matrix) |
svg |
63 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.577e+00 | 0.0220 | 47.0 | 6.52% | 2031.8 | 4.31% | motif file (matrix) |
svg |
64 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.547e+00 | 0.0222 | 39.0 | 5.41% | 1611.8 | 3.42% | motif file (matrix) |
svg |
65 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.244e+00 | 0.0296 | 33.0 | 4.58% | 1329.1 | 2.82% | motif file (matrix) |
svg |
66 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.216e+00 | 0.0299 | 18.0 | 2.50% | 593.2 | 1.26% | motif file (matrix) |
svg |
67 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -5.181e+00 | 0.0305 | 28.0 | 3.88% | 1080.3 | 2.29% | motif file (matrix) |
svg |
68 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.169e+00 | 0.0305 | 28.0 | 3.88% | 1081.4 | 2.29% | motif file (matrix) |
svg |
69 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.862e+00 | 0.0408 | 12.0 | 1.66% | 344.2 | 0.73% | motif file (matrix) |
svg |
70 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.816e+00 | 0.0421 | 26.0 | 3.61% | 1010.8 | 2.14% | motif file (matrix) |
svg |
71 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.771e+00 | 0.0434 | 18.0 | 2.50% | 621.6 | 1.32% | motif file (matrix) |
svg |
72 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -4.711e+00 | 0.0455 | 48.0 | 6.66% | 2189.4 | 4.64% | motif file (matrix) |
svg |