Information for 19-GACCGGTCAG (Motif 27)

A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A G T C G A T C C T A G C T A G A C G T A G T C
p-value:1e-5
log p-value:-1.228e+01
Information Content per bp:1.886
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 14.9bp
Average Position of motif in Background40.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACCGGTCAG---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GACCGGTCAG---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GACCGGTCAG---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GACCGGTCAG---
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GACCGGTCAG---
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GACCGGTCAG
---AGGTCA-
 A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GACCGGTCAG
-AGRGGTCA-
 A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACCGGTCAG------
TGGACCAATCAGCACTCT
 A C G T A C G T A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

XBP1/MA0844.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACCGGTCAG-
AATGCCACGTCATC
 A C G T A C G T A C G T A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GACCGGTCAG
---NTGTCAN
 A C T G C G T A A G T C G A T C C T A G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A