Information for 24-ATAAGCACACACA (Motif 24)

C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C T G C G A T A T C G A G T C A C G T A C G T C G T A A C G T
p-value:1e-6
log p-value:-1.555e+01
Information Content per bp:1.946
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets19.5 +/- 7.9bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATAAGCACACACA---
AGCGGCACACACGCAA
 C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATAAGCACACACA---
CGAAGCACACAAAATA
 C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATAAGCACACACA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATAAGCACACACA
-WAAGTAAAYA--
 C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATAAGCACACACA-
TACATGTGCACATAAAA
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATAAGCACACACA
-AAAGTAAACA--
 C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATAAGCACACACA
-AAAGTAAACA--
 C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATAAGCACACACA-
CAGATGTGCACATACGT
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATAAGCACACACA
--AAGGTCAC---
 C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATAAGCACACACA
--AAGCACTTAA-
 C G T A A C G T C G T A C G T A A C T G A T G C C G T A A G T C C G T A A G T C C G T A A G T C G T C A
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T