p-value: | 1e-11 |
log p-value: | -2.572e+01 |
Information Content per bp: | 1.930 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 1.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.8 +/- 29.2bp |
Average Position of motif in Background | 27.6 +/- 4.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0168.1_Sox14_2/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTCCTATTGTGT--- -NNNCCATTGTGTNAN |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTCCTATTGTGT----- -CNNNTATTGTTCNNNNN |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTCCTATTGTGT--- TGTTCCCATTGTGTACT |
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SOX9/MA0077.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCTCCTATTGTGT ----CCATTGTTC |
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Sox17/MA0078.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCTCCTATTGTGT ---CTCATTGTC- |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCTCCTATTGTGT ---NCCATTGTTY |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCTCCTATTGTGT- ----CCATTGTTYB |
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PB0106.1_Arid5a_2/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTCCTATTGTGT- TNNTTTCGTATTNNANN |
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SRY/MA0084.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCTCCTATTGTGT-- ------ATTGTTTAN |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTCCTATTGTGT CCCCCTGCTGTG- |
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