Information for 4-AGAGACTTTCCCT (Motif 5)

C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T
Reverse Opposite:
C G T A C A T G A C T G C T A G C G T A C T G A C G T A A C T G A G C T G T A C C G A T G A T C A C G T
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.802
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.0 +/- 20.6bp
Average Position of motif in Background52.6 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AGAGACTTTCCCT---
----ACTTTCACTTTC
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGAGACTTTCCCT----
--TCACTTTCACTTTCN
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAGACTTTCCCT
-GGGAATTTCC--
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGAGACTTTCCCT-
----ATTTTCCATT
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGAGACTTTCCCT-
----ATTTTCCATT
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAGACTTTCCCT-
----ATTTTCCATT
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAGACTTTCCCT
NGGGGATTTCCC-
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAGACTTTCCCT
-GGGAATTTCC--
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGAGACTTTCCCT-
----ATTTTCCATT
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGAGACTTTCCCT
-GGGGATTTCC--
 C G T A C T A G C G T A A C T G C T G A G T A C C G A T A G C T A C G T A G T C G T A C G T A C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T