p-value: | 1e-9 |
log p-value: | -2.085e+01 |
Information Content per bp: | 1.788 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.80% |
Number of Background Sequences with motif | 6.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 62.8 +/- 27.9bp |
Average Position of motif in Background | 42.0 +/- 16.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | ATATCATTTAAAACTA ------TTTGAAACCG |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATATCATTTAAAACTA TAAGCCACTTGAAATT- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | ATATCATTTAAAACTA -----ATTTGAATT-- |
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BARHL2/MA0635.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATATCATTTAAAACTA --ANCGTTTANN---- |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATATCATTTAAAACTA TAAGCCACTTGAATTT- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATATCATTTAAAACTA TAAGCCACTTAACATT- |
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PB0169.1_Sox15_2/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATATCATTTAAAACTA TNGAATTTCATTNAN----- |
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SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATATCATTTAAAACTA AAGATATCCTT-------- |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATATCATTTAAAACTA ATAACCACTTGAAAATT |
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Nkx2-5/MA0063.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ATATCATTTAAAACTA ----CAATTAA----- |
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