Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-272 | -6.273e+02 | 0.0000 | 405.0 | 57.94% | 3263.3 | 6.98% | motif file (matrix) |
svg |
2 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-264 | -6.089e+02 | 0.0000 | 350.0 | 50.07% | 2178.4 | 4.66% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-254 | -5.854e+02 | 0.0000 | 360.0 | 51.50% | 2551.4 | 5.46% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-247 | -5.698e+02 | 0.0000 | 361.0 | 51.65% | 2693.8 | 5.76% | motif file (matrix) |
svg |
5 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-213 | -4.908e+02 | 0.0000 | 229.0 | 32.76% | 839.0 | 1.79% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-186 | -4.305e+02 | 0.0000 | 302.0 | 43.20% | 2511.8 | 5.37% | motif file (matrix) |
svg |
7 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-179 | -4.129e+02 | 0.0000 | 282.0 | 40.34% | 2210.6 | 4.73% | motif file (matrix) |
svg |
8 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-173 | -3.994e+02 | 0.0000 | 304.0 | 43.49% | 2858.7 | 6.11% | motif file (matrix) |
svg |
9 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-162 | -3.738e+02 | 0.0000 | 238.0 | 34.05% | 1604.1 | 3.43% | motif file (matrix) |
svg |
10 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-151 | -3.491e+02 | 0.0000 | 252.0 | 36.05% | 2099.8 | 4.49% | motif file (matrix) |
svg |
11 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-143 | -3.311e+02 | 0.0000 | 256.0 | 36.62% | 2365.8 | 5.06% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-134 | -3.099e+02 | 0.0000 | 187.0 | 26.75% | 1105.8 | 2.36% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-112 | -2.589e+02 | 0.0000 | 311.0 | 44.49% | 5063.9 | 10.83% | motif file (matrix) |
svg |
14 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-56 | -1.297e+02 | 0.0000 | 217.0 | 31.04% | 4426.8 | 9.47% | motif file (matrix) |
svg |
15 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-52 | -1.214e+02 | 0.0000 | 163.0 | 23.32% | 2676.2 | 5.72% | motif file (matrix) |
svg |
16 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-47 | -1.088e+02 | 0.0000 | 129.0 | 18.45% | 1843.5 | 3.94% | motif file (matrix) |
svg |
17 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-45 | -1.051e+02 | 0.0000 | 161.0 | 23.03% | 2966.9 | 6.34% | motif file (matrix) |
svg |
18 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-44 | -1.035e+02 | 0.0000 | 120.0 | 17.17% | 1669.9 | 3.57% | motif file (matrix) |
svg |
19 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-21 | -4.915e+01 | 0.0000 | 153.0 | 21.89% | 4490.9 | 9.60% | motif file (matrix) |
svg |
20 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-17 | -3.948e+01 | 0.0000 | 189.0 | 27.04% | 6793.5 | 14.53% | motif file (matrix) |
svg |
21 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-15 | -3.601e+01 | 0.0000 | 130.0 | 18.60% | 4078.5 | 8.72% | motif file (matrix) |
svg |
22 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-15 | -3.480e+01 | 0.0000 | 166.0 | 23.75% | 5919.9 | 12.66% | motif file (matrix) |
svg |
23 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-15 | -3.473e+01 | 0.0000 | 107.0 | 15.31% | 3088.5 | 6.60% | motif file (matrix) |
svg |
24 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-14 | -3.284e+01 | 0.0000 | 79.0 | 11.30% | 1973.7 | 4.22% | motif file (matrix) |
svg |
25 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-13 | -3.195e+01 | 0.0000 | 80.0 | 11.44% | 2048.1 | 4.38% | motif file (matrix) |
svg |
26 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-13 | -3.060e+01 | 0.0000 | 89.0 | 12.73% | 2486.7 | 5.32% | motif file (matrix) |
svg |
27 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-12 | -2.800e+01 | 0.0000 | 74.0 | 10.59% | 1958.8 | 4.19% | motif file (matrix) |
svg |
28 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-10 | -2.479e+01 | 0.0000 | 49.0 | 7.01% | 1081.5 | 2.31% | motif file (matrix) |
svg |
29 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-10 | -2.368e+01 | 0.0000 | 46.0 | 6.58% | 1004.2 | 2.15% | motif file (matrix) |
svg |
30 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-9 | -2.245e+01 | 0.0000 | 115.0 | 16.45% | 4176.4 | 8.93% | motif file (matrix) |
svg |
31 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-9 | -2.126e+01 | 0.0000 | 58.0 | 8.30% | 1571.7 | 3.36% | motif file (matrix) |
svg |
32 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-8 | -2.037e+01 | 0.0000 | 21.0 | 3.00% | 266.2 | 0.57% | motif file (matrix) |
svg |
33 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-8 | -2.011e+01 | 0.0000 | 260.0 | 37.20% | 12581.4 | 26.91% | motif file (matrix) |
svg |
34 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-7 | -1.830e+01 | 0.0000 | 23.0 | 3.29% | 359.4 | 0.77% | motif file (matrix) |
svg |
35 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-6 | -1.544e+01 | 0.0000 | 61.0 | 8.73% | 2001.5 | 4.28% | motif file (matrix) |
svg |
36 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-6 | -1.475e+01 | 0.0000 | 95.0 | 13.59% | 3747.7 | 8.01% | motif file (matrix) |
svg |
37 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-5 | -1.354e+01 | 0.0000 | 48.0 | 6.87% | 1509.1 | 3.23% | motif file (matrix) |
svg |
38 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.343e+01 | 0.0000 | 42.0 | 6.01% | 1245.7 | 2.66% | motif file (matrix) |
svg |
39 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-5 | -1.155e+01 | 0.0001 | 68.0 | 9.73% | 2619.2 | 5.60% | motif file (matrix) |
svg |
40 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-4 | -1.149e+01 | 0.0001 | 33.0 | 4.72% | 947.7 | 2.03% | motif file (matrix) |
svg |
41 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.114e+01 | 0.0001 | 35.0 | 5.01% | 1052.8 | 2.25% | motif file (matrix) |
svg |
42 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-4 | -1.043e+01 | 0.0003 | 47.0 | 6.72% | 1654.6 | 3.54% | motif file (matrix) |
svg |
43 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-4 | -1.020e+01 | 0.0003 | 164.0 | 23.46% | 8177.0 | 17.49% | motif file (matrix) |
svg |
44 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-4 | -9.680e+00 | 0.0005 | 23.0 | 3.29% | 605.4 | 1.29% | motif file (matrix) |
svg |
45 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.947e+00 | 0.0011 | 42.0 | 6.01% | 1514.5 | 3.24% | motif file (matrix) |
svg |
46 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.758e+00 | 0.0012 | 37.0 | 5.29% | 1284.0 | 2.75% | motif file (matrix) |
svg |
47 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.497e+00 | 0.0016 | 21.0 | 3.00% | 572.4 | 1.22% | motif file (matrix) |
svg |
48 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.475e+00 | 0.0016 | 179.0 | 25.61% | 9371.2 | 20.04% | motif file (matrix) |
svg |
49 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -8.281e+00 | 0.0019 | 8.0 | 1.14% | 107.9 | 0.23% | motif file (matrix) |
svg |
50 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-3 | -8.205e+00 | 0.0020 | 37.0 | 5.29% | 1322.2 | 2.83% | motif file (matrix) |
svg |
51 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.977e+00 | 0.0024 | 28.0 | 4.01% | 908.2 | 1.94% | motif file (matrix) |
svg |
52 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.946e+00 | 0.0025 | 32.0 | 4.58% | 1098.9 | 2.35% | motif file (matrix) |
svg |
53 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -7.815e+00 | 0.0028 | 20.0 | 2.86% | 560.3 | 1.20% | motif file (matrix) |
svg |
54 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -7.772e+00 | 0.0028 | 36.0 | 5.15% | 1304.2 | 2.79% | motif file (matrix) |
svg |
55 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-3 | -7.722e+00 | 0.0029 | 68.0 | 9.73% | 2986.0 | 6.39% | motif file (matrix) |
svg |
56 |
| Sp1(Zf)/Promoter/Homer | 1e-3 | -7.536e+00 | 0.0035 | 11.0 | 1.57% | 217.9 | 0.47% | motif file (matrix) |
svg |
57 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.432e+00 | 0.0038 | 40.0 | 5.72% | 1530.2 | 3.27% | motif file (matrix) |
svg |
58 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -6.896e+00 | 0.0064 | 154.0 | 22.03% | 8140.1 | 17.41% | motif file (matrix) |
svg |
59 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -6.687e+00 | 0.0077 | 25.0 | 3.58% | 846.8 | 1.81% | motif file (matrix) |
svg |
60 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.675e+00 | 0.0077 | 165.0 | 23.61% | 8858.4 | 18.94% | motif file (matrix) |
svg |
61 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -6.668e+00 | 0.0077 | 42.0 | 6.01% | 1699.9 | 3.64% | motif file (matrix) |
svg |
62 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.490e+00 | 0.0089 | 48.0 | 6.87% | 2034.4 | 4.35% | motif file (matrix) |
svg |
63 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -6.455e+00 | 0.0091 | 16.0 | 2.29% | 451.1 | 0.96% | motif file (matrix) |
svg |
64 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -6.346e+00 | 0.0100 | 16.0 | 2.29% | 456.3 | 0.98% | motif file (matrix) |
svg |
65 |
| PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.068e+00 | 0.0130 | 29.0 | 4.15% | 1084.9 | 2.32% | motif file (matrix) |
svg |
66 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.059e+00 | 0.0130 | 13.0 | 1.86% | 343.0 | 0.73% | motif file (matrix) |
svg |
67 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.059e+00 | 0.0130 | 101.0 | 14.45% | 5106.0 | 10.92% | motif file (matrix) |
svg |
68 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.900e+00 | 0.0147 | 38.0 | 5.44% | 1561.5 | 3.34% | motif file (matrix) |
svg |
69 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.849e+00 | 0.0152 | 209.0 | 29.90% | 11793.2 | 25.22% | motif file (matrix) |
svg |
70 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -5.847e+00 | 0.0152 | 16.0 | 2.29% | 480.4 | 1.03% | motif file (matrix) |
svg |
71 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.789e+00 | 0.0157 | 41.0 | 5.87% | 1731.1 | 3.70% | motif file (matrix) |
svg |
72 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.665e+00 | 0.0175 | 109.0 | 15.59% | 5651.9 | 12.09% | motif file (matrix) |
svg |
73 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.649e+00 | 0.0176 | 14.0 | 2.00% | 402.3 | 0.86% | motif file (matrix) |
svg |
74 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.511e+00 | 0.0199 | 21.0 | 3.00% | 731.4 | 1.56% | motif file (matrix) |
svg |
75 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.430e+00 | 0.0213 | 5.0 | 0.72% | 70.7 | 0.15% | motif file (matrix) |
svg |
76 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.284e+00 | 0.0243 | 63.0 | 9.01% | 3013.1 | 6.44% | motif file (matrix) |
svg |
77 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -5.254e+00 | 0.0247 | 55.0 | 7.87% | 2563.2 | 5.48% | motif file (matrix) |
svg |
78 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.042e+00 | 0.0301 | 66.0 | 9.44% | 3221.6 | 6.89% | motif file (matrix) |
svg |
79 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -5.010e+00 | 0.0307 | 22.0 | 3.15% | 815.6 | 1.74% | motif file (matrix) |
svg |
80 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.951e+00 | 0.0322 | 6.0 | 0.86% | 111.3 | 0.24% | motif file (matrix) |
svg |
81 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.766e+00 | 0.0383 | 11.0 | 1.57% | 313.2 | 0.67% | motif file (matrix) |
svg |