Information for 9-CTGATAGCGCCTC (Motif 7)

A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
Reverse Opposite:
A T C G C G T A C T A G C T A G G A T C C A T G G A T C A C G T C G T A A C G T A G T C C G T A T C A G
p-value:1e-12
log p-value:-2.974e+01
Information Content per bp:1.675
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif241.3
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets43.5 +/- 23.7bp
Average Position of motif in Background50.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGATAGCGCCTC
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Six3/MA0631.1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGATAGCGCCTC
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGATAGCGCCTC
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGATAGCGCCTC
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGATAGCGCCTC
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGATAGCGCCTC
TTGACAGC-----
 A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGATAGCGCCTC
VBTGWCAGCB----
 A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGATAGCGCCTC
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGATAGCGCCTC
-AGATAAGA----
 A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGATAGCGCCTC
RHTGWCAR------
 A C G T A G T C C G A T A C T G G T C A G C A T G T C A C T A G G T A C C T A G G A T C A G T C C G A T A T G C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T