Information for 16-AGGGATCWAY (Motif 27)

C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T
Reverse Opposite:
C T G A A G C T C G A T A T C G C G T A A C G T A G T C A G T C A T G C C G A T
p-value:1e-6
log p-value:-1.541e+01
Information Content per bp:1.816
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif112.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets57.9 +/- 22.3bp
Average Position of motif in Background47.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0130.1_Otx2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AGGGATCWAY----
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGGGATCWAY
-NGGATTAN-
 C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AGGGATCWAY----
TGAAGGGATTAATCATC
 A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AGGGATCWAY---
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AGGGATCWAY----
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGGGATCWAY----
NANAGGGATTAATTATN
 A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AGGGATCWAY----
NNAAGGGATTAACGANT
 A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGGGATCWAY----
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGGGATCWAY---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGGGATCWAY---
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T C G T A A T C G A C T G A C T G C G T A A C G T A T G C C G T A C T G A A G C T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T