Information for 18-GCTGGCTGAAACAAGA (Motif 24)

A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C C G A T A C G T A C T G A C G T A C G T C G A T A G T C C G T A A C T G A G T C A G T C C G T A A T C G G T A C
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.925
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 15.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA
----ACTGAAACCA--
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCTGAAACAAGA---
AACCGGTTNNAACCGGTTTN
 A C G T A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GCTGGCTGAAACAAGA---
-------GWAAYHTGABMC
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA---
-------GWAAYHTGAKMC
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA
---TGCTGAGTCA---
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
A C G T A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA
---TGCTGACTCA---
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA
-CWGGCGGGAA-----
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA
----GCTGASTCAGCA
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
A C G T A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA
------GTAAACAAT-
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCTGGCTGAAACAAGA
-TWGTCTGV-------
 A C T G A T G C A C G T A C T G A C T G A G T C C G A T A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G G T C A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T