Information for 11-GKCTWAACTCWWTTGT (Motif 12)

A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A G T C A G C A T C G T A A C T G C G T A A C T G C G A T A C G T C G T A C G T A A C T G G T C A A G T C
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 22.9bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GKCTWAACTCWWTTGT------
-----ANNTCTATTGTTCNNNA
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0070.1_Sox30_1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GKCTWAACTCWWTTGT-----
-----ANNTCCATTGTTCNNN
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.56
Offset:9
Orientation:forward strand
Alignment:GKCTWAACTCWWTTGT---
---------CCATTGTTNY
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GKCTWAACTCWWTTGT-------
------AATCAATTGTTCCGCTA
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GKCTWAACTCWWTTGT--------
--TNNANNTCTATTGTTNTNNANN
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GKCTWAACTCWWTTGT-
---------CCWTTGTY
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GKCTWAACTCWWTTGT-----
------NNNCCATTGTGTNAN
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GKCTWAACTCWWTTGT
-TCTTATCTCCC----
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GKCTWAACTCWWTTGT--
--------NCCATTGTTC
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GKCTWAACTCWWTTGT--
---------CCATTGTTC
 A C T G C A G T A G T C A C G T C G A T C G T A C G T A A G T C A C G T A G T C C G A T C G T A A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C