Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-300 | -6.930e+02 | 0.0000 | 378.0 | 54.39% | 2215.8 | 4.73% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-281 | -6.478e+02 | 0.0000 | 414.0 | 59.57% | 3344.3 | 7.14% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-256 | -5.917e+02 | 0.0000 | 368.0 | 52.95% | 2704.8 | 5.78% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-250 | -5.757e+02 | 0.0000 | 368.0 | 52.95% | 2831.9 | 6.05% | motif file (matrix) |
svg |
5 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-243 | -5.618e+02 | 0.0000 | 248.0 | 35.68% | 819.4 | 1.75% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-198 | -4.563e+02 | 0.0000 | 315.0 | 45.32% | 2606.5 | 5.57% | motif file (matrix) |
svg |
7 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-173 | -3.990e+02 | 0.0000 | 276.0 | 39.71% | 2213.8 | 4.73% | motif file (matrix) |
svg |
8 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-166 | -3.839e+02 | 0.0000 | 244.0 | 35.11% | 1661.5 | 3.55% | motif file (matrix) |
svg |
9 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-159 | -3.681e+02 | 0.0000 | 294.0 | 42.30% | 2957.4 | 6.32% | motif file (matrix) |
svg |
10 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-149 | -3.448e+02 | 0.0000 | 252.0 | 36.26% | 2155.9 | 4.61% | motif file (matrix) |
svg |
11 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-134 | -3.106e+02 | 0.0000 | 248.0 | 35.68% | 2401.6 | 5.13% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-128 | -2.960e+02 | 0.0000 | 186.0 | 26.76% | 1188.4 | 2.54% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-110 | -2.544e+02 | 0.0000 | 315.0 | 45.32% | 5342.7 | 11.41% | motif file (matrix) |
svg |
14 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-44 | -1.023e+02 | 0.0000 | 126.0 | 18.13% | 1883.6 | 4.02% | motif file (matrix) |
svg |
15 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-43 | -9.932e+01 | 0.0000 | 195.0 | 28.06% | 4453.1 | 9.51% | motif file (matrix) |
svg |
16 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-42 | -9.866e+01 | 0.0000 | 116.0 | 16.69% | 1646.1 | 3.52% | motif file (matrix) |
svg |
17 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-40 | -9.292e+01 | 0.0000 | 151.0 | 21.73% | 2928.1 | 6.26% | motif file (matrix) |
svg |
18 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-39 | -9.020e+01 | 0.0000 | 142.0 | 20.43% | 2672.9 | 5.71% | motif file (matrix) |
svg |
19 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-22 | -5.262e+01 | 0.0000 | 204.0 | 29.35% | 6812.7 | 14.55% | motif file (matrix) |
svg |
20 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-15 | -3.619e+01 | 0.0000 | 147.0 | 21.15% | 4918.7 | 10.51% | motif file (matrix) |
svg |
21 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-14 | -3.305e+01 | 0.0000 | 82.0 | 11.80% | 2102.4 | 4.49% | motif file (matrix) |
svg |
22 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-14 | -3.295e+01 | 0.0000 | 133.0 | 19.14% | 4423.3 | 9.45% | motif file (matrix) |
svg |
23 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-11 | -2.704e+01 | 0.0000 | 47.0 | 6.76% | 948.3 | 2.03% | motif file (matrix) |
svg |
24 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-11 | -2.545e+01 | 0.0000 | 96.0 | 13.81% | 3082.6 | 6.59% | motif file (matrix) |
svg |
25 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.417e+01 | 0.0000 | 75.0 | 10.79% | 2187.5 | 4.67% | motif file (matrix) |
svg |
26 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-10 | -2.355e+01 | 0.0000 | 85.0 | 12.23% | 2673.6 | 5.71% | motif file (matrix) |
svg |
27 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-10 | -2.323e+01 | 0.0000 | 49.0 | 7.05% | 1140.6 | 2.44% | motif file (matrix) |
svg |
28 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-8 | -2.019e+01 | 0.0000 | 59.0 | 8.49% | 1673.8 | 3.58% | motif file (matrix) |
svg |
29 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-8 | -1.981e+01 | 0.0000 | 263.0 | 37.84% | 12894.2 | 27.55% | motif file (matrix) |
svg |
30 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-8 | -1.927e+01 | 0.0000 | 67.0 | 9.64% | 2076.8 | 4.44% | motif file (matrix) |
svg |
31 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-8 | -1.923e+01 | 0.0000 | 65.0 | 9.35% | 1988.0 | 4.25% | motif file (matrix) |
svg |
32 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-7 | -1.674e+01 | 0.0000 | 109.0 | 15.68% | 4341.5 | 9.28% | motif file (matrix) |
svg |
33 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-6 | -1.523e+01 | 0.0000 | 49.0 | 7.05% | 1475.0 | 3.15% | motif file (matrix) |
svg |
34 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-6 | -1.456e+01 | 0.0000 | 43.0 | 6.19% | 1242.8 | 2.66% | motif file (matrix) |
svg |
35 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-5 | -1.322e+01 | 0.0000 | 43.0 | 6.19% | 1309.9 | 2.80% | motif file (matrix) |
svg |
36 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.311e+01 | 0.0000 | 43.0 | 6.19% | 1315.0 | 2.81% | motif file (matrix) |
svg |
37 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-5 | -1.293e+01 | 0.0000 | 49.0 | 7.05% | 1601.9 | 3.42% | motif file (matrix) |
svg |
38 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-5 | -1.289e+01 | 0.0000 | 136.0 | 19.57% | 6223.3 | 13.30% | motif file (matrix) |
svg |
39 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.289e+01 | 0.0000 | 47.0 | 6.76% | 1510.0 | 3.23% | motif file (matrix) |
svg |
40 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-5 | -1.252e+01 | 0.0000 | 183.0 | 26.33% | 9028.9 | 19.29% | motif file (matrix) |
svg |
41 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.248e+01 | 0.0000 | 17.0 | 2.45% | 298.2 | 0.64% | motif file (matrix) |
svg |
42 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-4 | -1.122e+01 | 0.0001 | 46.0 | 6.62% | 1564.5 | 3.34% | motif file (matrix) |
svg |
43 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-4 | -1.104e+01 | 0.0001 | 74.0 | 10.65% | 2995.9 | 6.40% | motif file (matrix) |
svg |
44 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -9.949e+00 | 0.0004 | 34.0 | 4.89% | 1078.3 | 2.30% | motif file (matrix) |
svg |
45 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-4 | -9.855e+00 | 0.0004 | 40.0 | 5.76% | 1366.0 | 2.92% | motif file (matrix) |
svg |
46 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-4 | -9.599e+00 | 0.0005 | 32.0 | 4.60% | 1006.4 | 2.15% | motif file (matrix) |
svg |
47 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.355e+00 | 0.0007 | 71.0 | 10.22% | 2996.3 | 6.40% | motif file (matrix) |
svg |
48 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-4 | -9.327e+00 | 0.0007 | 30.0 | 4.32% | 930.6 | 1.99% | motif file (matrix) |
svg |
49 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-4 | -9.219e+00 | 0.0007 | 166.0 | 23.88% | 8513.0 | 18.19% | motif file (matrix) |
svg |
50 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.872e+00 | 0.0010 | 132.0 | 18.99% | 6529.5 | 13.95% | motif file (matrix) |
svg |
51 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.867e+00 | 0.0010 | 182.0 | 26.19% | 9550.9 | 20.40% | motif file (matrix) |
svg |
52 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.715e+00 | 0.0011 | 20.0 | 2.88% | 525.2 | 1.12% | motif file (matrix) |
svg |
53 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-3 | -8.441e+00 | 0.0015 | 42.0 | 6.04% | 1562.1 | 3.34% | motif file (matrix) |
svg |
54 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -8.298e+00 | 0.0017 | 46.0 | 6.62% | 1776.6 | 3.80% | motif file (matrix) |
svg |
55 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -8.296e+00 | 0.0017 | 32.0 | 4.60% | 1083.1 | 2.31% | motif file (matrix) |
svg |
56 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -8.179e+00 | 0.0018 | 15.0 | 2.16% | 346.2 | 0.74% | motif file (matrix) |
svg |
57 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.870e+00 | 0.0024 | 27.0 | 3.88% | 874.7 | 1.87% | motif file (matrix) |
svg |
58 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-3 | -7.770e+00 | 0.0027 | 84.0 | 12.09% | 3897.5 | 8.33% | motif file (matrix) |
svg |
59 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-3 | -7.690e+00 | 0.0028 | 65.0 | 9.35% | 2845.2 | 6.08% | motif file (matrix) |
svg |
60 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-3 | -7.645e+00 | 0.0029 | 12.0 | 1.73% | 251.9 | 0.54% | motif file (matrix) |
svg |
61 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -7.630e+00 | 0.0029 | 22.0 | 3.17% | 660.6 | 1.41% | motif file (matrix) |
svg |
62 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.748e+00 | 0.0069 | 14.0 | 2.01% | 358.4 | 0.77% | motif file (matrix) |
svg |
63 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -6.543e+00 | 0.0083 | 58.0 | 8.35% | 2589.4 | 5.53% | motif file (matrix) |
svg |
64 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -6.485e+00 | 0.0087 | 73.0 | 10.50% | 3440.8 | 7.35% | motif file (matrix) |
svg |
65 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -6.309e+00 | 0.0102 | 26.0 | 3.74% | 925.9 | 1.98% | motif file (matrix) |
svg |
66 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.239e+00 | 0.0108 | 70.0 | 10.07% | 3302.9 | 7.06% | motif file (matrix) |
svg |
67 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.202e+00 | 0.0110 | 39.0 | 5.61% | 1596.5 | 3.41% | motif file (matrix) |
svg |
68 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.890e+00 | 0.0148 | 46.0 | 6.62% | 2003.7 | 4.28% | motif file (matrix) |
svg |
69 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-2 | -5.696e+00 | 0.0177 | 19.0 | 2.73% | 629.7 | 1.35% | motif file (matrix) |
svg |
70 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -5.549e+00 | 0.0202 | 51.0 | 7.34% | 2318.5 | 4.95% | motif file (matrix) |
svg |
71 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.398e+00 | 0.0232 | 17.0 | 2.45% | 553.0 | 1.18% | motif file (matrix) |
svg |
72 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.393e+00 | 0.0232 | 14.0 | 2.01% | 417.3 | 0.89% | motif file (matrix) |
svg |
73 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.341e+00 | 0.0239 | 5.0 | 0.72% | 72.2 | 0.15% | motif file (matrix) |
svg |
74 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -5.314e+00 | 0.0242 | 27.0 | 3.88% | 1050.8 | 2.24% | motif file (matrix) |
svg |
75 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.288e+00 | 0.0245 | 6.0 | 0.86% | 104.9 | 0.22% | motif file (matrix) |
svg |
76 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.269e+00 | 0.0247 | 68.0 | 9.78% | 3325.4 | 7.10% | motif file (matrix) |
svg |
77 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.226e+00 | 0.0254 | 13.0 | 1.87% | 381.5 | 0.82% | motif file (matrix) |
svg |
78 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.143e+00 | 0.0273 | 41.0 | 5.90% | 1812.3 | 3.87% | motif file (matrix) |
svg |
79 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.082e+00 | 0.0286 | 216.0 | 31.08% | 12523.3 | 26.75% | motif file (matrix) |
svg |
80 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -4.929e+00 | 0.0329 | 56.0 | 8.06% | 2682.9 | 5.73% | motif file (matrix) |
svg |
81 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.909e+00 | 0.0332 | 83.0 | 11.94% | 4267.4 | 9.12% | motif file (matrix) |
svg |
82 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.849e+00 | 0.0348 | 7.0 | 1.01% | 150.6 | 0.32% | motif file (matrix) |
svg |
83 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -4.654e+00 | 0.0418 | 15.0 | 2.16% | 503.4 | 1.08% | motif file (matrix) |
svg |
84 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.646e+00 | 0.0418 | 12.0 | 1.73% | 365.2 | 0.78% | motif file (matrix) |
svg |