p-value: | 1e-8 |
log p-value: | -1.897e+01 |
Information Content per bp: | 1.870 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 4.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 23.3 +/- 6.0bp |
Average Position of motif in Background | 58.0 +/- 15.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----BCCTGCAGGCTAA GGCCYCCTGCTGDGH-- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --BCCTGCAGGCTAA CCCCCTGCTGTG--- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --BCCTGCAGGCTAA TCNCCTGCTGNGNNN |
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TFAP2A(var.2)/MA0810.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -BCCTGCAGGCTAA TGCCCCCGGGCA-- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --BCCTGCAGGCTAA TNTCCTGCTGTGNNG |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | BCCTGCAGGCTAA -CCTGCTGAGH-- |
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TFAP2B/MA0811.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -BCCTGCAGGCTAA TGCCCCAGGGCA-- |
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TFAP2C/MA0524.2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -BCCTGCAGGCTAA TGCCCTNGGGCA-- |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | BCCTGCAGGCTAA ---TGCTGACTCA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --BCCTGCAGGCTAA NNTCCTGCTGTGNNN |
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