Information for 12-ARCCWCTTCAAAGCCT (Motif 16)

C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
Reverse Opposite:
C G T A C T A G A C T G G T A C A G C T A G C T C G A T A T C G C G T A G C T A C A T G C G T A A C T G C T A G G A C T A G C T
p-value:1e-10
log p-value:-2.528e+01
Information Content per bp:1.724
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.9 +/- 24.9bp
Average Position of motif in Background43.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ARCCWCTTCAAAGCCT
----ACATCAAAGG--
 C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ARCCWCTTCAAAGCCT
ATAACCACTTGAAAATT-
 A C G T A C G T C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ARCCWCTTCAAAGCCT
TAAGCCACTTGAATTT--
 A C G T A C G T C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ARCCWCTTCAAAGCCT
TAAGCCACTTGAAATT--
 A C G T A C G T C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ARCCWCTTCAAAGCCT
----ACWTCAAAGG--
 C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ARCCWCTTCAAAGCCT
TAAGCCACTTAACATT--
 A C G T A C G T C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ARCCWCTTCAAAGCCT
TAAGCCACTTGAAATT--
 A C G T A C G T C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ARCCWCTTCAAAGCCT
----ACATCAAAGGNA
 C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ARCCWCTTCAAAGCCT
--AAAGATCAAAGGAA
 C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ARCCWCTTCAAAGCCT
-ACCACTTGAA-----
 C T G A C T G A A G T C A G T C G C A T G A T C C A G T A C G T A T G C G C T A C T G A C T G A A C T G A G T C A G T C C G A T
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T