Information for 8-TGTTAAATTTTAAVTA (Motif 12)

A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
Reverse Opposite:
A C G T T G C A A C T G A G C T A C G T C G T A C G T A C T G A G T C A C G A T C G A T C G A T C T G A C T G A A T G C G T C A
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.685
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.6 +/- 29.7bp
Average Position of motif in Background72.4 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGTTAAATTTTAAVTA
--TTAATGTTTAACC-
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTTAAATTTTAAVTA
NGTTAATNATTAACN-
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGTTAAATTTTAAVTA
-GTTAATNATTAA---
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTTAAATTTTAAVTA
-GTTAATGATTAAC--
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGTTAAATTTTAAVTA-----
----NNNTTTTAATTAANNNN
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTTAAATTTTAAVTA
ANNTCTATTGTTCNNNA
 A C G T A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TGTTAAATTTTAAVTA
-------ATTTGAATT
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAAATTTTAAVTA
NTTGTTTACGTTNN----
 A C G T A C G T A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGTTAAATTTTAAVTA-
-------NTTTTACGAC
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGTTAAATTTTAAVTA--
------ANTTTTACGACC
 A C G T A T C G G A C T A G C T C G T A C G T A G C T A C A G T A G C T A C G T A C G T T G C A C T G A T G A C A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C