Information for 17-CCGTCCGCTT (Motif 37)

A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
Reverse Opposite:
T G C A G C T A C T A G T G A C C T A G C A T G G C T A A G T C T A C G T C A G
p-value:1e-1
log p-value:-4.168e+00
Information Content per bp:1.739
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCGTCCGCTT
CAACGTCCGCGG
 A C G T A C G T A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCCGCTT---
TACTTCCGCTTTTT
 A C G T A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T A C G T A C G T A C G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

SPIC/MA0687.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCCGCTT---
TACTTCCTCTTTTN
 A C G T A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T A C G T A C G T A C G T
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGTCCGCTT---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

ETV5/MA0765.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCCGCTT
NACTTCCGGT-
 A C G T A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGTCCGCTT
VBSYGTCTGG--
 A C G T A C G T A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGTCCGCTT
-CTTCCGGT-
 A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCGTCCGCTT
-----NGCTN
 A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCGTCCGCTT
CTGTCTGG--
 A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCCGCTT
CACTTCCGCT-
 A C G T A G T C A T G C T C A G C G A T G T A C A G T C A C T G G A T C C G A T A C G T
G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T A C G T