Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-49 | -1.149e+02 | 0.0000 | 72.0 | 9.57% | 408.4 | 0.85% | motif file (matrix) |
svg |
2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-45 | -1.039e+02 | 0.0000 | 206.0 | 27.39% | 4489.4 | 9.32% | motif file (matrix) |
svg |
3 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-34 | -8.035e+01 | 0.0000 | 124.0 | 16.49% | 2155.3 | 4.47% | motif file (matrix) |
svg |
4 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-31 | -7.351e+01 | 0.0000 | 134.0 | 17.82% | 2668.1 | 5.54% | motif file (matrix) |
svg |
5 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-30 | -7.113e+01 | 0.0000 | 173.0 | 23.01% | 4243.1 | 8.80% | motif file (matrix) |
svg |
6 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-29 | -6.838e+01 | 0.0000 | 120.0 | 15.96% | 2311.9 | 4.80% | motif file (matrix) |
svg |
7 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-28 | -6.483e+01 | 0.0000 | 107.0 | 14.23% | 1956.5 | 4.06% | motif file (matrix) |
svg |
8 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-28 | -6.456e+01 | 0.0000 | 76.0 | 10.11% | 1012.2 | 2.10% | motif file (matrix) |
svg |
9 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-27 | -6.434e+01 | 0.0000 | 172.0 | 22.87% | 4457.3 | 9.25% | motif file (matrix) |
svg |
10 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-25 | -5.775e+01 | 0.0000 | 81.0 | 10.77% | 1281.8 | 2.66% | motif file (matrix) |
svg |
11 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-22 | -5.252e+01 | 0.0000 | 90.0 | 11.97% | 1690.5 | 3.51% | motif file (matrix) |
svg |
12 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-21 | -4.958e+01 | 0.0000 | 72.0 | 9.57% | 1175.2 | 2.44% | motif file (matrix) |
svg |
13 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-21 | -4.956e+01 | 0.0000 | 80.0 | 10.64% | 1430.5 | 2.97% | motif file (matrix) |
svg |
14 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-21 | -4.851e+01 | 0.0000 | 91.0 | 12.10% | 1832.3 | 3.80% | motif file (matrix) |
svg |
15 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-19 | -4.517e+01 | 0.0000 | 94.0 | 12.50% | 2039.5 | 4.23% | motif file (matrix) |
svg |
16 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-18 | -4.280e+01 | 0.0000 | 53.0 | 7.05% | 746.5 | 1.55% | motif file (matrix) |
svg |
17 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-15 | -3.628e+01 | 0.0000 | 59.0 | 7.85% | 1064.7 | 2.21% | motif file (matrix) |
svg |
18 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-12 | -2.857e+01 | 0.0000 | 45.0 | 5.98% | 796.4 | 1.65% | motif file (matrix) |
svg |
19 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-10 | -2.373e+01 | 0.0000 | 74.0 | 9.84% | 2054.3 | 4.26% | motif file (matrix) |
svg |
20 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-9 | -2.277e+01 | 0.0000 | 70.0 | 9.31% | 1930.5 | 4.01% | motif file (matrix) |
svg |
21 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-9 | -2.189e+01 | 0.0000 | 154.0 | 20.48% | 5980.0 | 12.41% | motif file (matrix) |
svg |
22 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-8 | -1.989e+01 | 0.0000 | 90.0 | 11.97% | 2972.4 | 6.17% | motif file (matrix) |
svg |
23 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-7 | -1.826e+01 | 0.0000 | 143.0 | 19.02% | 5729.2 | 11.89% | motif file (matrix) |
svg |
24 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-7 | -1.739e+01 | 0.0000 | 102.0 | 13.56% | 3720.5 | 7.72% | motif file (matrix) |
svg |
25 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-7 | -1.629e+01 | 0.0000 | 68.0 | 9.04% | 2180.8 | 4.53% | motif file (matrix) |
svg |
26 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-6 | -1.445e+01 | 0.0000 | 60.0 | 7.98% | 1927.6 | 4.00% | motif file (matrix) |
svg |
27 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.360e+01 | 0.0000 | 69.0 | 9.18% | 2401.6 | 4.98% | motif file (matrix) |
svg |
28 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.301e+01 | 0.0000 | 72.0 | 9.57% | 2587.6 | 5.37% | motif file (matrix) |
svg |
29 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-5 | -1.255e+01 | 0.0000 | 36.0 | 4.79% | 982.1 | 2.04% | motif file (matrix) |
svg |
30 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.239e+01 | 0.0001 | 87.0 | 11.57% | 3381.1 | 7.02% | motif file (matrix) |
svg |
31 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-5 | -1.228e+01 | 0.0001 | 38.0 | 5.05% | 1078.1 | 2.24% | motif file (matrix) |
svg |
32 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.224e+01 | 0.0001 | 20.0 | 2.66% | 386.5 | 0.80% | motif file (matrix) |
svg |
33 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-5 | -1.194e+01 | 0.0001 | 43.0 | 5.72% | 1311.9 | 2.72% | motif file (matrix) |
svg |
34 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.166e+01 | 0.0001 | 24.0 | 3.19% | 545.2 | 1.13% | motif file (matrix) |
svg |
35 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.056e+01 | 0.0003 | 80.0 | 10.64% | 3192.4 | 6.62% | motif file (matrix) |
svg |
36 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-4 | -9.807e+00 | 0.0006 | 251.0 | 33.38% | 12975.7 | 26.93% | motif file (matrix) |
svg |
37 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.791e+00 | 0.0006 | 37.0 | 4.92% | 1166.0 | 2.42% | motif file (matrix) |
svg |
38 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-4 | -9.780e+00 | 0.0006 | 122.0 | 16.22% | 5518.9 | 11.45% | motif file (matrix) |
svg |
39 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -9.724e+00 | 0.0006 | 59.0 | 7.85% | 2210.8 | 4.59% | motif file (matrix) |
svg |
40 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -9.189e+00 | 0.0009 | 52.0 | 6.91% | 1910.9 | 3.97% | motif file (matrix) |
svg |
41 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -9.186e+00 | 0.0009 | 34.0 | 4.52% | 1067.9 | 2.22% | motif file (matrix) |
svg |
42 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -9.131e+00 | 0.0009 | 39.0 | 5.19% | 1297.2 | 2.69% | motif file (matrix) |
svg |
43 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -9.087e+00 | 0.0010 | 52.0 | 6.91% | 1918.6 | 3.98% | motif file (matrix) |
svg |
44 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-3 | -9.085e+00 | 0.0010 | 39.0 | 5.19% | 1300.3 | 2.70% | motif file (matrix) |
svg |
45 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-3 | -8.952e+00 | 0.0010 | 44.0 | 5.85% | 1543.4 | 3.20% | motif file (matrix) |
svg |
46 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.546e+00 | 0.0015 | 38.0 | 5.05% | 1289.5 | 2.68% | motif file (matrix) |
svg |
47 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -8.544e+00 | 0.0015 | 29.0 | 3.86% | 882.9 | 1.83% | motif file (matrix) |
svg |
48 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -8.414e+00 | 0.0017 | 94.0 | 12.50% | 4163.8 | 8.64% | motif file (matrix) |
svg |
49 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -8.172e+00 | 0.0021 | 20.0 | 2.66% | 521.6 | 1.08% | motif file (matrix) |
svg |
50 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.125e+00 | 0.0022 | 28.0 | 3.72% | 861.8 | 1.79% | motif file (matrix) |
svg |
51 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.070e+00 | 0.0022 | 31.0 | 4.12% | 999.0 | 2.07% | motif file (matrix) |
svg |
52 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-3 | -7.743e+00 | 0.0030 | 164.0 | 21.81% | 8210.2 | 17.04% | motif file (matrix) |
svg |
53 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.498e+00 | 0.0038 | 240.0 | 31.91% | 12773.8 | 26.51% | motif file (matrix) |
svg |
54 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.282e+00 | 0.0046 | 50.0 | 6.65% | 1973.1 | 4.09% | motif file (matrix) |
svg |
55 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.211e+00 | 0.0049 | 15.0 | 1.99% | 362.8 | 0.75% | motif file (matrix) |
svg |
56 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.151e+00 | 0.0051 | 32.0 | 4.26% | 1103.5 | 2.29% | motif file (matrix) |
svg |
57 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.770e+00 | 0.0073 | 40.0 | 5.32% | 1518.3 | 3.15% | motif file (matrix) |
svg |
58 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -6.615e+00 | 0.0084 | 60.0 | 7.98% | 2558.1 | 5.31% | motif file (matrix) |
svg |
59 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -6.599e+00 | 0.0084 | 47.0 | 6.25% | 1885.4 | 3.91% | motif file (matrix) |
svg |
60 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.339e+00 | 0.0107 | 224.0 | 29.79% | 12065.0 | 25.04% | motif file (matrix) |
svg |
61 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.212e+00 | 0.0120 | 58.0 | 7.71% | 2498.4 | 5.18% | motif file (matrix) |
svg |
62 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.176e+00 | 0.0122 | 81.0 | 10.77% | 3748.6 | 7.78% | motif file (matrix) |
svg |
63 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.051e+00 | 0.0136 | 59.0 | 7.85% | 2570.7 | 5.33% | motif file (matrix) |
svg |
64 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.894e+00 | 0.0157 | 13.0 | 1.73% | 334.0 | 0.69% | motif file (matrix) |
svg |
65 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.847e+00 | 0.0162 | 58.0 | 7.71% | 2541.6 | 5.27% | motif file (matrix) |
svg |
66 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.842e+00 | 0.0162 | 18.0 | 2.39% | 546.6 | 1.13% | motif file (matrix) |
svg |
67 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.788e+00 | 0.0166 | 67.0 | 8.91% | 3034.8 | 6.30% | motif file (matrix) |
svg |
68 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.746e+00 | 0.0171 | 29.0 | 3.86% | 1062.1 | 2.20% | motif file (matrix) |
svg |
69 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -5.615e+00 | 0.0192 | 16.0 | 2.13% | 471.6 | 0.98% | motif file (matrix) |
svg |
70 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.583e+00 | 0.0196 | 6.0 | 0.80% | 93.3 | 0.19% | motif file (matrix) |
svg |
71 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.301e+00 | 0.0256 | 13.0 | 1.73% | 359.0 | 0.75% | motif file (matrix) |
svg |
72 |
| Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer | 1e-2 | -5.199e+00 | 0.0279 | 39.0 | 5.19% | 1613.4 | 3.35% | motif file (matrix) |
svg |
73 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.095e+00 | 0.0306 | 69.0 | 9.18% | 3241.3 | 6.73% | motif file (matrix) |
svg |
74 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -4.953e+00 | 0.0347 | 47.0 | 6.25% | 2061.5 | 4.28% | motif file (matrix) |
svg |
75 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -4.716e+00 | 0.0434 | 147.0 | 19.55% | 7822.7 | 16.23% | motif file (matrix) |
svg |
76 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.670e+00 | 0.0449 | 46.0 | 6.12% | 2042.6 | 4.24% | motif file (matrix) |
svg |